RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 ACTR10Q9NZ32 417 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 CBLCQ9ULV8 474 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 FZD10Q9ULW2 581 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 ASB1Q9Y576 335 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 HEBP2Q9Y5Z4 205 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 RCCD1A6NED2 376 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 C2CD4BA6NLJ0 364 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 EIF3CLB5ME19 914 aaKnown RBP6.03□□□□□ -1.44
SDCBP-203ENST00000424270 BTN3A3O00478 584 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 BTN3A1O00481 513 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 PSMA7O14818 248 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 PDE9AO76083 593 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 LSM8O95777 96 aaKnown RBP6.03□□□□□ -1.44
SDCBP-203ENST00000424270 HEXBP07686 556 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 ICAM2P13598 275 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 NID1P14543 1247 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 CD53P19397 219 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 TACR1P25103 407 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 AKT1P31749 480 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 HTR7P34969 479 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 ARSEP51690 589 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 PMS1P54277 932 aaKnown RBP6.03□□□□□ -1.44
SDCBP-203ENST00000424270 FANCCQ00597 558 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 APBA1Q02410 837 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 FASTKQ14296 549 aaKnown RBP6.03□□□□□ -1.44
SDCBP-203ENST00000424270 CAMK4Q16566 473 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 FNBP1LQ5T0N5 605 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 FKBP15Q5T1M5 1219 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 GPRC6AQ5T6X5 926 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 SPINK14Q6IE38 97 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 ZNF585AQ6P3V2 769 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 TRIM65Q6PJ69 517 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 SPESP1Q6UW49 350 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 UNC5DQ6UXZ4 953 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 FAM83HQ6ZRV2 1179 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-203ENST00000424270 RIPOR1Q6ZS17 1223 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 RFX8Q6ZV50 586 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 ARCQ7LC44 396 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 AMIGO1Q86WK6 493 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 RAVER1Q8IY67 606 aaKnown RBP6.03□□□□□ -1.44
SDCBP-203ENST00000424270 BEST3Q8N1M1 668 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 RPRMLQ8N4K4 120 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 C3orf20Q8ND61 904 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 ACVR1CQ8NER5 493 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 PSMF1Q92530 271 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 ZNF354BQ96LW1 612 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 CEP63Q96MT8 703 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 SIGLEC12Q96PQ1 595 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 WDR24Q96S15 920 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 EIF3CQ99613 913 aaKnown RBP6.03□□□□□ -1.44
SDCBP-203ENST00000424270 C11orf70Q9BRQ4 267 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 PITPNM3Q9BZ71 974 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 GPR63Q9BZJ6 419 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 PLA2G12AQ9BZM1 189 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 POLR1EQ9GZS1 481 aaKnown RBP6.03□□□□□ -1.44
SDCBP-203ENST00000424270 XKR8Q9H6D3 395 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 ZFYVE1Q9HBF4 777 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 LRTM1Q9HBL6 345 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 PCDH9Q9HC56 1237 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 FAM60AQ9NP50 221 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 SLC22A11Q9NSA0 550 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 ZNF282Q9UDV7 671 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-203ENST00000424270 AP4E1Q9UPM8 1137 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 PLCL2Q9UPR0 1127 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 SHOC2Q9UQ13 582 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 PPIL1Q9Y3C6 166 aa6.03□□□□□ -1.44
SDCBP-203ENST00000424270 HYKKA2RU49 373 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 TUBAL3A6NHL2 446 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 IFRD1O00458 451 aaPredicted RBP6.02□□□□□ -1.45
SDCBP-203ENST00000424270 CLDN4O14493 209 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 DSCR3O14972 297 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 CCP110O43303 1012 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 CNOT4O95628 575 aaKnown RBP6.02□□□□□ -1.45
SDCBP-203ENST00000424270 CTSBP07858 339 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 COX6A1P12074 109 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 ERCC2P18074 760 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 SLC9A1P19634 815 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 EMP2P54851 167 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 AIF1P55008 147 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 DSC2Q02487 901 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 TUBA3CQ13748 450 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 PPP2R5EQ16537 467 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 SLC25A35Q3KQZ1 300 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 KRTAP24-1Q3LI83 254 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 PDPK2PQ6A1A2 396 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 KLHL10Q6JEL2 608 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 TUBA3EQ6PEY2 450 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 TMEM220Q6QAJ8 160 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 KDELC1Q6UW63 502 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 GBP6Q6ZN66 633 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 DET1Q7L5Y6 550 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 NPWQ8N729 165 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 GPR26Q8NDV2 337 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 STT3BQ8TCJ2 826 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 BRSK1Q8TDC3 778 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 PIGTQ969N2 578 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 HGH1Q9BTY7 390 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 ADGRE3Q9BY15 652 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 KCNK13Q9HB14 408 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 CUTCQ9NTM9 273 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms