RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 SLC22A18Q96BI1 424 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 FAM136AQ96C01 138 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 C16orf45Q96MC5 204 aaPredicted RBP10.6□□□□□ -0.71
USP49-204ENST00000423567 FCRL4Q96PJ5 515 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 EFHD1Q9BUP0 239 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 TUBB2BQ9BVA1 445 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 SYTL2Q9HCH5 934 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 FGF21Q9NSA1 209 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 LNPEPQ9UIQ6 1025 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 PILRAQ9UKJ1 303 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 FBXO5Q9UKT4 447 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 PLAGL1Q9UM63 463 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 CHMP2BQ9UQN3 213 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 CDYLQ9Y232 598 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 BTRCQ9Y297 605 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 SNX24Q9Y343 169 aa10.6□□□□□ -0.71
USP49-204ENST00000423567 UTP11Q9Y3A2 253 aaKnown RBP10.6□□□□□ -0.71
USP49-204ENST00000423567 TMEM184BQ9Y519 407 aaPredicted RBP10.6□□□□□ -0.71
USP49-204ENST00000423567 ISM1B1AKI9 464 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 K7ENP7 123 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 EFSO43281 561 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 VPS26AO75436 327 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 SPAG6O75602 509 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 KIAA0754O94854 1291 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 CCNYL3P0C7X3 344 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 ERVK-10P10266 1014 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 FOLR1P15328 257 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 UGT2B7P16662 529 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 PKLRP30613 574 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 ELK3P41970 407 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 MPP1Q00013 466 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 RHDQ02161 417 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 C2orf54Q08AI8 447 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 MAP7Q14244 749 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 KIR2DS3Q14952 304 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 KYNUQ16719 465 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 MSS51Q4VC12 460 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 ZNF789Q5FWF6 425 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 HP1BP3Q5SSJ5 553 aaPredicted RBP10.59□□□□□ -0.71
USP49-204ENST00000423567 UGT3A1Q6NUS8 523 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 INO80CQ6PI98 192 aaPredicted RBP10.59□□□□□ -0.71
USP49-204ENST00000423567 FBXO38Q6PIJ6 1188 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 CNSTQ6PJW8 725 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 KIAA0408Q6ZU52 694 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 KCNJ9Q92806 393 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 TRIM44Q96DX7 344 aaPredicted RBP10.59□□□□□ -0.71
USP49-204ENST00000423567 CERS2Q96G23 380 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 UBL7Q96S82 380 aaPredicted RBP10.59□□□□□ -0.71
USP49-204ENST00000423567 ERP44Q9BS26 406 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 PITPNM3Q9BZ71 974 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 RAB17Q9H0T7 212 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 GPN2Q9H9Y4 310 aaPredicted RBP10.59□□□□□ -0.71
USP49-204ENST00000423567 LATS2Q9NRM7 1088 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 FAM114A2Q9NRY5 505 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 KLHL42Q9P2K6 505 aa10.59□□□□□ -0.71
USP49-204ENST00000423567 A0A0J9YY10 115 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 EIF4E1BA6NMX2 242 aaKnown RBP10.58□□□□□ -0.72
USP49-204ENST00000423567 RASGRF2O14827 1237 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 RAD51CO43502 376 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 HAUS5O94927 633 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 C1orf105O95561 183 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 DLGAP3O95886 979 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 CATP04040 527 aaKnown RBP10.58□□□□□ -0.72
USP49-204ENST00000423567 TUBB4AP04350 444 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 ENO3P13929 434 aaPredicted RBP10.58□□□□□ -0.72
USP49-204ENST00000423567 ST6GAL1P15907 406 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 CD9P21926 228 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 BDKRB1P46663 353 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 RPL21P46778 160 aaKnown RBP10.58□□□□□ -0.72
USP49-204ENST00000423567 CARSP49589 748 aaKnown RBP10.58□□□□□ -0.72
USP49-204ENST00000423567 ABHD18Q0P651 414 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 PDIA2Q13087 525 aaKnown RBP10.58□□□□□ -0.72
USP49-204ENST00000423567 GPR19Q15760 415 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 SLC5A12Q1EHB4 618 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 NEK10Q6ZWH5 1172 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 TMEM126BQ8IUX1 230 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 UNC5BQ8IZJ1 945 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 C19orf47Q8N9M1 422 aaKnown RBP10.58□□□□□ -0.72
USP49-204ENST00000423567 C2CD4AQ8NCU7 369 aaPredicted RBP10.58□□□□□ -0.72
USP49-204ENST00000423567 FBXO36Q8NEA4 188 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 OR2L8Q8NGY9 312 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 SNRNP27Q8WVK2 155 aaKnown RBP10.58□□□□□ -0.72
USP49-204ENST00000423567 ZNF592Q92610 1267 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 INPP5DQ92835 1189 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 TCTN2Q96GX1 697 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 PPM1MQ96MI6 270 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 TRAPPC9Q96Q05 1148 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 NRTNQ99748 197 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 SLC7A5P2Q9GIP4 190 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 KLHL25Q9H0H3 589 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 DPH5Q9H2P9 285 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 INTS7Q9NVH2 962 aaKnown RBP10.58□□□□□ -0.72
USP49-204ENST00000423567 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.58□□□□□ -0.72
USP49-204ENST00000423567 WHRNQ9P202 907 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 CIDEBQ9UHD4 219 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 TRMT6Q9UJA5 497 aaKnown RBP10.58□□□□□ -0.72
USP49-204ENST00000423567 CDC23Q9UJX2 597 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 NFS1Q9Y697 457 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 ADAMTS20P59510 1910 aa10.58□□□□□ -0.72
USP49-204ENST00000423567 ZZEF1O43149 2961 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms