RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 MMP27Q9H306 513 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 OSGEPL1Q9H4B0 414 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 ARHGEF38Q9NXL2 777 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 LRWD1Q9UFC0 647 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 TUBE1Q9UJT0 475 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 VPS28Q9UK41 221 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 FEZF1A0PJY2 475 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 TMEM221A6NGB7 291 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 GFPT2O94808 682 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 PDX1P52945 283 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 MAZP56270 477 aaKnown RBP3.41□□□□□ -1.86
LINC00397-201ENST00000422074 DMPKQ09013 629 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 PRKG2Q13237 762 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 ITPRIPL2Q3MIP1 535 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 GLIPR1L2Q4G1C9 344 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 FASTKD1Q53R41 847 aaKnown RBP3.41□□□□□ -1.86
LINC00397-201ENST00000422074 C20orf194Q5TEA3 1177 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 SPATA1Q5VX52 437 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 FAM205BPQ63HN1 556 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 FIP1L1Q6UN15 594 aaKnown RBP3.41□□□□□ -1.86
LINC00397-201ENST00000422074 PCGF5Q86SE9 256 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 NUDT13Q86X67 352 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 LACC1Q8IV20 430 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 FAM114A1Q8IWE2 563 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 KIRREL3Q8IZU9 778 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 AMER3Q8N944 861 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 NPEPL1Q8NDH3 523 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 OR10G8Q8NGN5 311 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 OR52N5Q8NH56 324 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 ZFAND2BQ8WV99 257 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 FAM120BQ96EK7 910 aaKnown RBP3.41□□□□□ -1.86
LINC00397-201ENST00000422074 NSMCE3Q96MG7 304 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 MAK16Q9BXY0 300 aaKnown RBP3.41□□□□□ -1.86
LINC00397-201ENST00000422074 CCDC68Q9H2F9 335 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 GHITMQ9H3K2 345 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 SLC7A10Q9NS82 523 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 SPHK1Q9NYA1 384 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 B3GAT1Q9P2W7 334 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 SWAP70Q9UH65 585 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 GPR34Q9UPC5 381 aa3.41□□□□□ -1.86
LINC00397-201ENST00000422074 ADAMTS9Q9P2N4 1935 aa3.4□□□□□ -1.86
LINC00397-201ENST00000422074 MEX3AA1L020 520 aaKnown RBP3.4□□□□□ -1.87
LINC00397-201ENST00000422074 ANKUB1A6NFN9 424 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 B4DLN1 442 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 K7ENM7 598 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 AVILO75366 819 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 VTNP04004 478 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 OR2T7P0C7T2 308 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 TRIM49P0CI25 452 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 TRIM49CP0CI26 452 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 SHC1P29353 583 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 TLX1P31314 330 aaPredicted RBP3.4□□□□□ -1.87
LINC00397-201ENST00000422074 HNF4AP41235 474 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 MRPL12P52815 198 aaKnown RBP3.4□□□□□ -1.87
LINC00397-201ENST00000422074 GSCP56915 257 aaPredicted RBP3.4□□□□□ -1.87
LINC00397-201ENST00000422074 MC1RQ01726 317 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 CREB5Q02930 508 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 DRP2Q13474 957 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 WTAPQ15007 396 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 SPDYCQ5MJ68 293 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 DOK6Q6PKX4 331 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 IL27RAQ6UWB1 636 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 TMEM139Q8IV31 216 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 TAGAPQ8N103 731 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 C17orf53Q8N3J3 647 aaPredicted RBP3.4□□□□□ -1.87
LINC00397-201ENST00000422074 GTF3AQ92664 365 aaKnown RBP3.4□□□□□ -1.87
LINC00397-201ENST00000422074 AZIN2Q96A70 460 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 NUDT16L1Q9BRJ7 211 aaKnown RBP3.4□□□□□ -1.87
LINC00397-201ENST00000422074 KIFC3Q9BVG8 833 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 WWTR1Q9GZV5 400 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 SERINC1Q9NRX5 453 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 TERF2IPQ9NYB0 399 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 KLK13Q9UKR3 277 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 TRIM17Q9Y577 477 aa3.4□□□□□ -1.87
LINC00397-201ENST00000422074 LOC100509620A0A075B734 347 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 LOC102723996A0A087X1L8 192 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 KPNA7A9QM74 516 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 EPM2AB3EWF7 344 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 CTDSP2O14595 271 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 ADAMDEC1O15204 470 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 TSPAN1O60635 241 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 ZSCAN5DPP0CG00 497 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 UGT1A4P22310 534 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 GATA2P23769 480 aaPredicted RBP3.39□□□□□ -1.87
LINC00397-201ENST00000422074 GABRA5P31644 462 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 HOXD13P35453 343 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 LEPRP48357 1165 aaKnown RBP3.39□□□□□ -1.87
LINC00397-201ENST00000422074 SLC9A3P48764 834 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 HUNKP57058 714 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 SLC8A3P57103 927 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 CHAF1BQ13112 559 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 CUL4AQ13619 759 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 PCLAFQ15004 111 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 UGP2Q16851 508 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 C15orf59Q2T9L4 293 aaPredicted RBP3.39□□□□□ -1.87
LINC00397-201ENST00000422074 HLA-BQ31612 363 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 CFAP58Q5T655 872 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 SLC25A47Q6Q0C1 308 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 CLEC4GQ6UXB4 293 aa3.39□□□□□ -1.87
LINC00397-201ENST00000422074 TMPRSS11FQ6ZWK6 438 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms