RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 WWP1Q9H0M0 922 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 TMEM168Q9H0V1 697 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 EPN3Q9H201 632 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 DPEP2Q9H4A9 486 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 RABEP2Q9H5N1 569 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 KLC4Q9NSK0 619 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 KLQ9UEF7 1012 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 ZNHIT2Q9UHR6 403 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 MID2Q9UJV3 735 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 ZNF225Q9UK10 706 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 PCOLCE2Q9UKZ9 415 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 RNF112Q9ULX5 631 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 DYRK1BQ9Y463 629 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 ATXN2Q99700 1313 aaKnown RBP6.66□□□□□ -1.34
CPS1-202ENST00000417946 HEATR5BQ9P2D3 2071 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 KLHL33A6NCF5 533 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 GMNCA6NCL1 334 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 FAM86C2PA6NEL3 165 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 NCF1BA6NI72 391 aaPredicted RBP6.65□□□□□ -1.34
CPS1-202ENST00000417946 NCF1CA8MVU1 366 aaPredicted RBP6.65□□□□□ -1.34
CPS1-202ENST00000417946 MEI4A8MW99 385 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 TMEM233B4DJY2 109 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 F8W8V4 182 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 E2F3O00716 465 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 VILLO15195 856 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 NPHS1O60500 1241 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 C1orf105O95561 183 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 JUNP05412 331 aaKnown RBP6.65□□□□□ -1.34
CPS1-202ENST00000417946 SP9P0CG40 484 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 ERGP11308 486 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 NCF1P14598 390 aaPredicted RBP6.65□□□□□ -1.34
CPS1-202ENST00000417946 NME1P15531 152 aaKnown RBP6.65□□□□□ -1.34
CPS1-202ENST00000417946 ALOX15P16050 662 aaPredicted RBP6.65□□□□□ -1.34
CPS1-202ENST00000417946 VCLP18206 1134 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 KELP23276 732 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 ITPKAP23677 461 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 IMPA1P29218 277 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 EEF1DP29692 281 aaKnown RBP6.65□□□□□ -1.34
CPS1-202ENST00000417946 PRDX3P30048 256 aaKnown RBP6.65□□□□□ -1.34
CPS1-202ENST00000417946 GGT5P36269 586 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 THOP1P52888 689 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 ALDH18A1P54886 795 aaKnown RBP6.65□□□□□ -1.34
CPS1-202ENST00000417946 CDH13P55290 713 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 ABCE1P61221 599 aaKnown RBP6.65□□□□□ -1.34
CPS1-202ENST00000417946 RACK1P63244 317 aaKnown RBP6.65□□□□□ -1.34
CPS1-202ENST00000417946 OVGP1Q12889 678 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 TRAF3Q13114 568 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 RCN2Q14257 317 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 CLCA4Q14CN2 919 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 SHBQ15464 509 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 TERF2Q15554 542 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 PFKFB4Q16877 469 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 UAP1L1Q3KQV9 507 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 ZNF542PQ5EBM4 170 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 ARL13AQ5H913 290 aaPredicted RBP6.65□□□□□ -1.34
CPS1-202ENST00000417946 CDKL4Q5MAI5 379 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 UNC5DQ6UXZ4 953 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 WASH2PQ6VEQ5 465 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 CHST15Q7LFX5 561 aaPredicted RBP6.65□□□□□ -1.34
CPS1-202ENST00000417946 PIGWQ7Z7B1 504 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 TAX1BP1Q86VP1 789 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 IQCHQ86VS3 1027 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 PARGQ86W56 976 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 PHACTR4Q8IZ21 702 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 FBXO39Q8N4B4 442 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 ZBTB44Q8NCP5 570 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 OR5AR1Q8NGP9 310 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 LRRC8CQ8TDW0 803 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 DYDC1Q8WWB3 177 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 FBXL8Q96CD0 374 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 PHF21BQ96EK2 531 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 KLHDC7BQ96G42 594 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 PRR11Q96HE9 360 aaPredicted RBP6.65□□□□□ -1.34
CPS1-202ENST00000417946 SPACA7Q96KW9 195 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 TSNARE1Q96NA8 513 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 OR4K3Q96R72 315 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 CCT8L2Q96SF2 557 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 PKP4Q99569 1192 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 LRRC61Q9BV99 259 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 KCNK13Q9HB14 408 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 PARVBQ9HBI1 364 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 WASH6PQ9NQA3 447 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 PRDM8Q9NQV8 689 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 AASDHPPTQ9NRN7 309 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 TMEM74BQ9NUR3 256 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 PNPOQ9NVS9 261 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 TRNAU1APQ9NX07 287 aaKnown RBP6.65□□□□□ -1.34
CPS1-202ENST00000417946 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.65□□□□□ -1.34
CPS1-202ENST00000417946 STOX2Q9P2F5 926 aaPredicted RBP6.65□□□□□ -1.34
CPS1-202ENST00000417946 TBC1D29Q9UFV1 150 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 CIDEBQ9UHD4 219 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 PSMD13Q9UNM6 376 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 SH2B3Q9UQQ2 575 aa6.65□□□□□ -1.34
CPS1-202ENST00000417946 PCM1Q15154 2024 aa6.65□□□□□ -1.35
CPS1-202ENST00000417946 GOLGA4Q13439 2230 aaKnown RBP6.64□□□□□ -1.35
CPS1-202ENST00000417946 ASXL3Q9C0F0 2248 aa6.64□□□□□ -1.35
CPS1-202ENST00000417946 CUL9Q8IWT3 2517 aa6.64□□□□□ -1.35
CPS1-202ENST00000417946 KCNE1BA0A087WTH5 132 aa6.64□□□□□ -1.35
CPS1-202ENST00000417946 A0A1B0GVT2 93 aa6.64□□□□□ -1.35
CPS1-202ENST00000417946 OR52A4PA6NMU1 304 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms