RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 BYSLQ13895 437 aaKnown RBP5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 ACOX1Q15067 660 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 OASLQ15646 514 aaKnown RBP5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 PARP15Q460N3 678 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 IGFL4Q6B9Z1 124 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 Q6YL49 198 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 DPY19L3Q6ZPD9 716 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 ZNF551Q7Z340 670 aaPredicted RBP5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 SETD3Q86TU7 594 aaPredicted RBP5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 VRK3Q8IV63 474 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 MFN1Q8IWA4 741 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 KLHL7Q8IXQ5 586 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 CCDC105Q8IYK2 499 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 CARNMT1Q8N4J0 409 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 MMGT1Q8N4V1 131 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 ZNF557Q8N988 423 aaPredicted RBP5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 CCNYQ8ND76 341 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 OR1N1Q8NGS0 311 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 FIBINQ8TAL6 211 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 TFB1MQ8WVM0 346 aaKnown RBP5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 RSC1A1Q92681 617 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 ATP2A3Q93084 1043 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 ZFYVE19Q96K21 471 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 RUNDC3BQ96NL0 473 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 OLFM3Q96PB7 478 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 KRT12Q99456 494 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 FAM118BQ9BPY3 351 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 RTKNQ9BST9 563 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 RPP25Q9BUL9 199 aaKnown RBP5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 TRMT61BQ9BVS5 477 aaKnown RBP5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 BBS2Q9BXC9 721 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 SLC2A11Q9BYW1 496 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 SLC39A8Q9C0K1 460 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 DDX47Q9H0S4 455 aaKnown RBP5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 EBF3Q9H4W6 596 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 ECT2Q9H8V3 914 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 FSCN3Q9NQT6 498 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 PLK2Q9NYY3 685 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 LRIT1Q9P2V4 623 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 LPAR3Q9UBY5 353 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 PCYOX1Q9UHG3 505 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 DNPEPQ9ULA0 475 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 CLEC4EQ9ULY5 219 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 GPR52Q9Y2T5 361 aa5.89□□□□□ -1.47
NIFKP3-201ENST00000417799 NUP210Q8TEM1 1887 aaPredicted RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 HELZP42694 1942 aaKnown RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 A0A0D9SEW6 157 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 BCLAF3A2AJT9 711 aaKnown RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 ARHGAP42A6NI28 874 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 HOXC11O43248 304 aaPredicted RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 DHHO43323 396 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 CACNG3O60359 315 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 CBFA2T3O75081 653 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 ZNF189O75820 626 aaPredicted RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 ESRRBO95718 433 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 RHOCP08134 193 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 DLDP09622 509 aaKnown RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 HSD3B1P14060 373 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 CCNCP24863 283 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 GDI1P31150 447 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 AKT1P31749 480 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 STIP1P31948 543 aaKnown RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 ACVRL1P37023 503 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 MPLP40238 635 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 KCNJ1P48048 391 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 PAPOLAP51003 745 aaKnown RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 PLK1P53350 603 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 SEC24CP53992 1094 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 SUMO2P61956 95 aaKnown RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 AP2B1P63010 937 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 TUBB4BP68371 445 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 MRPS35P82673 323 aaKnown RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 GNA12Q03113 381 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 ZNF33AQ06730 810 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 PPIDQ08752 370 aaKnown RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 AP1B1Q10567 949 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 MTAPQ13126 283 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 RUNX3Q13761 415 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 DHX34Q14147 1143 aaKnown RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 CSHL1Q14406 222 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 ST3GAL2Q16842 350 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 AAK1Q2M2I8 961 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 SLC45A4Q5BKX6 768 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 FSCBQ5H9T9 825 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 ATPAF1Q5TC12 328 aaPredicted RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 TTC27Q6P3X3 843 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 CCDC137Q6PK04 289 aaKnown RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 USP51Q70EK9 711 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 B4GALNT4Q76KP1 1039 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 PARS2Q7L3T8 475 aaKnown RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 CDKL3Q8IVW4 592 aaPredicted RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 CCDC13Q8IYE1 715 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 ATPAF2Q8N5M1 289 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 ALLCQ8N6M5 410 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 NOA1Q8NC60 698 aaKnown RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 OR52K2Q8NGK3 314 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 RP9Q8TA86 221 aaKnown RBP5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 CCDC26Q8TAB7 109 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 WFDC5Q8TCV5 224 aa5.88□□□□□ -1.47
NIFKP3-201ENST00000417799 GRK7Q8WTQ7 553 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms