RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 GTF2H2Q13888 395 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 PLA2G4EQ3MJ16 856 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 CRTC2Q53ET0 693 aaPredicted RBP12.65□□□□□ -0.38
SCN1B-202ENST00000415950 GTF2H2CQ6P1K8 395 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 SMARCD3Q6STE5 483 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 ADGRG2Q8IZP9 1017 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 ARMC5Q96C12 935 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 KCNC2Q96PR1 638 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 FCRL5Q96RD9 977 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 PTPN18Q99952 460 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 BHLHE41Q9C0J9 482 aaPredicted RBP12.65□□□□□ -0.38
SCN1B-202ENST00000415950 TRIT1Q9H3H1 467 aaKnown RBP12.65□□□□□ -0.38
SCN1B-202ENST00000415950 CD320Q9NPF0 282 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 MRPL17Q9NRX2 175 aaKnown RBP12.65□□□□□ -0.38
SCN1B-202ENST00000415950 CD84Q9UIB8 345 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 ZNF451Q9Y4E5 1061 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 NUMBLQ9Y6R0 609 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 SH3PXD2BA1X283 911 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 SCAMP1O15126 338 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 SLC7A4O43246 635 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 GABBR2O75899 941 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 SLC35G4P0C7Q5 338 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 PRSS56P0CW18 603 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 ZNF10P21506 573 aaPredicted RBP12.65□□□□□ -0.38
SCN1B-202ENST00000415950 GMFBP60983 142 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 MRPS6P82932 125 aaKnown RBP12.65□□□□□ -0.38
SCN1B-202ENST00000415950 NANOGP8Q6NSW7 305 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 LILRA2Q8N149 483 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 CXorf40AQ8TE69 158 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 TNFAIP8L1Q8WVP5 186 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 CDKN2AIPNLQ96HQ2 116 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 IGFLR1Q9H665 355 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 RPF2Q9H7B2 306 aaKnown RBP12.65□□□□□ -0.38
SCN1B-202ENST00000415950 NANOGQ9H9S0 305 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 CICQ96RK0 1608 aaPredicted RBP12.65□□□□□ -0.38
SCN1B-202ENST00000415950 A0A0U1RQS6 177 aa12.65□□□□□ -0.39
SCN1B-202ENST00000415950 SLIT2O94813 1529 aa12.65□□□□□ -0.39
SCN1B-202ENST00000415950 CLDN9O95484 217 aa12.65□□□□□ -0.39
SCN1B-202ENST00000415950 PRAMEF1O95521 474 aa12.65□□□□□ -0.39
SCN1B-202ENST00000415950 ECDO95905 644 aaPredicted RBP12.65□□□□□ -0.39
SCN1B-202ENST00000415950 C5P01031 1676 aa12.65□□□□□ -0.39
SCN1B-202ENST00000415950 ATF4P18848 351 aaPredicted RBP12.65□□□□□ -0.39
SCN1B-202ENST00000415950 RPL3P39023 403 aaKnown RBP12.65□□□□□ -0.39
SCN1B-202ENST00000415950 FAM189BP81408 668 aa12.65□□□□□ -0.39
SCN1B-202ENST00000415950 HERC3Q15034 1050 aa12.65□□□□□ -0.39
SCN1B-202ENST00000415950 CYP27C1Q4G0S4 372 aa12.65□□□□□ -0.39
SCN1B-202ENST00000415950 ATXN7L2Q5T6C5 722 aaPredicted RBP12.65□□□□□ -0.39
SCN1B-202ENST00000415950 ADAMTS15Q8TE58 950 aa12.65□□□□□ -0.39
SCN1B-202ENST00000415950 CXorf40BQ96DE9 158 aa12.65□□□□□ -0.39
SCN1B-202ENST00000415950 NPY6RQ99463 290 aa12.65□□□□□ -0.39
SCN1B-202ENST00000415950 TVP23BQ9NYZ1 205 aa12.65□□□□□ -0.39
SCN1B-202ENST00000415950 MAPRE3Q9UPY8 281 aa12.65□□□□□ -0.39
SCN1B-202ENST00000415950 PCDHGA4Q9Y5G9 962 aa12.65□□□□□ -0.39
SCN1B-202ENST00000415950 GLYATL1P3A0A0U1RQE8 302 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 SLC30A4O14863 429 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 DENRO43583 198 aaKnown RBP12.64□□□□□ -0.39
SCN1B-202ENST00000415950 CSF2P04141 144 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 DBIP07108 87 aaKnown RBP12.64□□□□□ -0.39
SCN1B-202ENST00000415950 IQCF3P0C7M6 154 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 AMD1P17707 334 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 MTA1Q13330 715 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 MOGQ16653 247 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 SLC7A5P1Q8MH63 180 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 KDM1BQ8NB78 822 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 MYO19Q96H55 970 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 MARCH4Q9P2E8 410 aaPredicted RBP12.64□□□□□ -0.39
SCN1B-202ENST00000415950 C10orf71Q711Q0 1435 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 GSAPA4D1B5 854 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 C7orf72A4D263 438 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 TCAF2A6NFQ2 919 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 SAGE2PA6NJ88 616 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 ZNF879B4DU55 563 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 GTPBP1O00178 669 aaKnown RBP12.64□□□□□ -0.39
SCN1B-202ENST00000415950 PLK4O00444 970 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 GLUD1P00367 558 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 ELFN1P0C7U0 828 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 CTSEP14091 401 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 KCNA5P22460 613 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 OR4D2P58180 307 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.64□□□□□ -0.39
SCN1B-202ENST00000415950 TRNP1Q6NT89 227 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 PPTC7Q8NI37 304 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 PTCD2Q8WV60 388 aaKnown RBP12.64□□□□□ -0.39
SCN1B-202ENST00000415950 WDR83Q9BRX9 315 aaKnown RBP12.64□□□□□ -0.39
SCN1B-202ENST00000415950 PRDM8Q9NQV8 689 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 DNAJB9Q9UBS3 223 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 COL14A1Q05707 1796 aaKnown RBP12.64□□□□□ -0.39
SCN1B-202ENST00000415950 A0A1W2PP18 115 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 FABP12A6NFH5 140 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 FAM189A1O60320 539 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 USP2O75604 605 aaPredicted RBP12.64□□□□□ -0.39
SCN1B-202ENST00000415950 CHRM1P11229 460 aaPredicted RBP12.64□□□□□ -0.39
SCN1B-202ENST00000415950 MAPK8P45983 427 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 ARSDP51689 593 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 BNC1Q01954 994 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 HSF2Q03933 536 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 E2F2Q14209 437 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 GANABQ14697 944 aaKnown RBP12.64□□□□□ -0.39
SCN1B-202ENST00000415950 SIRPB2Q5JXA9 342 aa12.64□□□□□ -0.39
SCN1B-202ENST00000415950 DCST1Q5T197 706 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms