RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 SYDE1Q6ZW31 735 aaPredicted RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 MARK2Q7KZI7 788 aaKnown RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 TECPR1Q7Z6L1 1165 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 HEATR4Q86WZ0 1026 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 SLC13A5Q86YT5 568 aaPredicted RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 SFTPA2Q8IWL1 248 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 REXO1L1PQ8IX06 675 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 BCL6BQ8N143 479 aaPredicted RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 NDUFAF2Q8N183 169 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 SLC35F6Q8N357 371 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 CHCHD4Q8N4Q1 142 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 FAM71DQ8N9W8 422 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 ZNF548Q8NEK5 533 aaPredicted RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 BLOC1S5Q8TDH9 187 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 ASB12Q8WXK4 309 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 OR1E3Q8WZA6 343 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 ANP32BQ92688 251 aaKnown RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 AP2M1Q96CW1 435 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 EID2BQ96D98 161 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 PDXPQ96GD0 296 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 MS4A14Q96JA4 679 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 CNDP2Q96KP4 475 aaKnown RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 MRGPRX4Q96LA9 322 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 TRIB3Q96RU7 358 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 VRK1Q99986 396 aaPredicted RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 TMEM121Q9BTD3 319 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 MLPHQ9BV36 600 aaPredicted RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 LRRC61Q9BV99 259 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 RIOK2Q9BVS4 552 aaKnown RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 TLR10Q9BXR5 811 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 GPR63Q9BZJ6 419 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 WDR12Q9GZL7 423 aaKnown RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 CLPBQ9H078 707 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 GBA3Q9H227 469 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 VPS11Q9H270 941 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 WDR26Q9H7D7 661 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 MANSC1Q9H8J5 431 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 ERVMER34-1Q9H9K5 563 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 FGF22Q9HCT0 170 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 KCND1Q9NSA2 647 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 PIH1D1Q9NWS0 290 aaKnown RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 SMARCAL1Q9NZC9 954 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 KLQ9UEF7 1012 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 APOBEC3BQ9UH17 382 aaKnown RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 CDC42EP3Q9UKI2 254 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 KLK13Q9UKR3 277 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 DNPEPQ9ULA0 475 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 PYCARDQ9ULZ3 195 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 TMEM98Q9Y2Y6 226 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 ZNF711Q9Y462 761 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 PLEKHM1Q9Y4G2 1056 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 PCDHGB2Q9Y5G2 931 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 GOLGA4Q13439 2230 aaKnown RBP4.82□□□□□ -1.64
VPS41-205ENST00000414632 RP1P56715 2156 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 A0A0G2JNJ9 132 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 A0A1W2PPL8 197 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 CCDC78A2IDD5 438 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 FAM149AA5PLN7 773 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 CCL22O00626 93 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 YKT6O15498 198 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 AQP9O43315 295 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 LIASO43766 372 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 DFNA5O60443 496 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 PHF2O75151 1096 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 METTL18O95568 372 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 LDOC1O95751 146 aaPredicted RBP4.82□□□□□ -1.64
VPS41-205ENST00000414632 NDST3O95803 873 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 SOD1P00441 154 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 IFNB1P01574 187 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 FGGP02679 453 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 CSF2P04141 144 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 ATP1A1P05023 1023 aaKnown RBP4.82□□□□□ -1.64
VPS41-205ENST00000414632 ADRB1P08588 477 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 ZSCAN5DPP0CG00 497 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 GIMD1P0DJR0 217 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 GAAP10253 952 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 CTSEP14091 401 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 TSHRP16473 764 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 NFKBIAP25963 317 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 CA5AP35218 305 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 TNNT3P45378 269 aaPredicted RBP4.82□□□□□ -1.64
VPS41-205ENST00000414632 GNPDA1P46926 289 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 STT3AP46977 705 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 KCNJ1P48048 391 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 RXRGP48443 463 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 SPINT3P49223 89 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 ITGA1P56199 1179 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 PER3P56645 1201 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 SRP54P61011 504 aaKnown RBP4.82□□□□□ -1.64
VPS41-205ENST00000414632 HNRNPKP61978 463 aaKnown RBP eCLIP4.82□□□□□ -1.64
VPS41-205ENST00000414632 YPEL5P62699 121 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 CDK3Q00526 305 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 PPARDQ03181 441 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 MTM1Q13496 603 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 PTK2BQ14289 1009 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 RTP5Q14D33 572 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 SIX1Q15475 284 aaPredicted RBP4.82□□□□□ -1.64
VPS41-205ENST00000414632 CDKN3Q16667 212 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 C19orf54Q5BKX5 351 aa4.82□□□□□ -1.64
VPS41-205ENST00000414632 IZUMO3Q5VZ72 239 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms