RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 PHACTR4Q8IZ21 702 aa13.63□□□□□ -0.23
CLTCL1-201ENST00000412649 SLC22A17Q8WUG5 538 aa13.63□□□□□ -0.23
CLTCL1-201ENST00000412649 FBXO8Q9NRD0 319 aa13.63□□□□□ -0.23
CLTCL1-201ENST00000412649 THUMPD1Q9NXG2 353 aaKnown RBP13.63□□□□□ -0.23
CLTCL1-201ENST00000412649 PCDHA9Q9Y5H5 950 aa13.63□□□□□ -0.23
CLTCL1-201ENST00000412649 ATAD5Q96QE3 1844 aa13.63□□□□□ -0.23
CLTCL1-201ENST00000412649 COL18A1P39060 1754 aa13.63□□□□□ -0.23
CLTCL1-201ENST00000412649 TTC24A2A3L6 582 aaPredicted RBP13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 CDC7O00311 574 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 FPGTO14772 594 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 GGT5P36269 586 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 HSPA7P48741 367 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 AKR1D1P51857 326 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 SPANXN4Q5MJ08 99 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 ANKRD49Q8WVL7 239 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 B3GALT6Q96L58 329 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 SMURF1Q9HCE7 757 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 PCDHGB3Q9Y5G1 929 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 ARVCFO00192 962 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 PDPK1O15530 556 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 KIAA0513O60268 411 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 ANXA5P08758 320 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 EIF2DP41214 584 aaKnown RBP13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 RPP38P78345 283 aaKnown RBP13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 ZNF33AQ06730 810 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 TARBP2Q15633 366 aaKnown RBP13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 LRIT3Q3SXY7 679 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 HDDC2Q7Z4H3 204 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 ZNF599Q96NL3 588 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 PLAC1Q9HBJ0 212 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 NDST3O95803 873 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 LPOP22079 712 aaPredicted RBP13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 ZNF267Q14586 743 aaPredicted RBP13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 USP39Q53GS9 565 aaKnown RBP13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 TBPL2Q6SJ96 375 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 FAM110BQ8TC76 370 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 C12orf42Q96LP6 360 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 MYH14Q7Z406 1995 aaKnown RBP13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 PLD2O14939 933 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 ALX3O95076 343 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 STAU1O95793 577 aaKnown RBP13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 SLC2A2P11168 524 aaPredicted RBP13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 PTPN2P17706 415 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 ENDOUP21128 410 aaKnown RBP13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 MC4RP32245 332 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 HTR7P34969 479 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 POLR2IP36954 125 aaKnown RBP13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 RABGGTBP53611 331 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 CDH12P55289 794 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 RPS14P62263 151 aaKnown RBP13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 AQP6Q13520 282 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 ZNF767PQ75MW2 155 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 SPATC1Q76KD6 591 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 TSPYL5Q86VY4 417 aaPredicted RBP13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 CACTIN-AS1Q8N1I8 211 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 TMEM130Q8N3G9 435 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 HOXD1Q9GZZ0 328 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 BPIFA1Q9NP55 256 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 MALT1Q9UDY8 824 aa13.62□□□□□ -0.23
CLTCL1-201ENST00000412649 PRAMEF33A0A0G2JMD5 474 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 SMIM28A0A1B0GU29 152 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 SLC12A8A0AV02 714 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 CASTOR2A6NHX0 329 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 MRPS14O60783 128 aaKnown RBP13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 PRAMEF10O60809 474 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 GSTM1P09488 218 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 PPIBP23284 216 aaKnown RBP13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 RPS3P23396 243 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 CDKN2DP55273 166 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 FOXA1P55317 472 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 ABHD18Q0P651 414 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 PON2Q15165 354 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 GPR162Q16538 588 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 FAM83FQ8NEG4 500 aaPredicted RBP13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 ASPNQ9BXN1 380 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 FAM83DQ9H4H8 585 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 ACOT13Q9NPJ3 140 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 THG1LQ9NWX6 298 aaKnown RBP13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 NUFIP1Q9UHK0 495 aaKnown RBP13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 PFKMP08237 780 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 ANXA8P13928 327 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 POU2F1P14859 743 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 HOXD11P31277 338 aaPredicted RBP13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 CDK10Q15131 360 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 IQCCQ4KMZ1 466 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 SIDT2Q8NBJ9 832 aaKnown RBP13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 RHEBL1Q8TAI7 183 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 APOLD1Q96LR9 279 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 POLR2J2Q9GZM3 115 aaKnown RBP13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 ZNF385DQ9H6B1 395 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 MAGIXQ9H6Y5 334 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 PCDHB14Q9Y5E9 798 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 DLGAP1O14490 977 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 GPR182O15218 404 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 STBD1O95210 358 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 AXLP30530 894 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 CA5AP35218 305 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 APLP1P51693 650 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 HMGCS1Q01581 520 aa13.61□□□□□ -0.23
CLTCL1-201ENST00000412649 CELF2-AS1Q8N7Q2 184 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms