RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 LPCAT1Q8NF37 534 aa9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 LRRC8CQ8TDW0 803 aa9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 ECHDC3Q96DC8 303 aa9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 RNF31Q96EP0 1072 aa9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 CDKN2AIPNLQ96HQ2 116 aa9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 DNAJC1Q96KC8 554 aaKnown RBP9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 LYSMD1Q96S90 227 aa9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 TCF12Q99081 682 aa9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 CTRCQ99895 268 aa9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 TRIM55Q9BYV6 548 aa9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 C12orf65Q9H3J6 166 aaKnown RBP9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 RABEP2Q9H5N1 569 aa9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 ATP13A3Q9H7F0 1226 aa9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 MANSC1Q9H8J5 431 aa9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 SLAMF7Q9NQ25 335 aa9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 SLC25A13Q9UJS0 675 aa9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 POLHQ9Y253 713 aa9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 PCDHB3Q9Y5E6 796 aa9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 DCHS2Q6V1P9 2916 aa9.33□□□□□ -0.92
SOX9-AS1-201ENST00000412640 A0A096LPK6 155 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 A0A0J9YYE9 177 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 FAM95CA0A1B0GW59 222 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 CCDC162PA2VCL2 907 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 ERICH4A6NGS2 130 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 CD3EAPO15446 510 aaKnown RBP9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 HAUS5O94927 633 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 WISP3O95389 354 aaPredicted RBP9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 TGDSO95455 350 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 GOT2P00505 430 aaKnown RBP9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 TRBC1P01850 177 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 APOA4P06727 396 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 SNRPB2P08579 225 aaKnown RBP9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 SLC35E2BP0CK96 405 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 PNLIPP16233 465 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 ALDH4A1P30038 563 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 CSTF2P33240 577 aaKnown RBP eCLIP9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 IGFALSP35858 605 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 SLC26A3P40879 764 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 PGDP52209 483 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 HK3P52790 923 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 RAB10P61026 200 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 PDAP1Q13442 181 aaKnown RBP9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 USP10Q14694 798 aaKnown RBP9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 MYLK3Q32MK0 819 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 CARD16Q5EG05 197 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 CGB2Q6NT52 195 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 JMJD6Q6NYC1 403 aaPredicted RBP9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 C22orf39Q6P5X5 142 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 AFTPHQ6ULP2 937 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 MACC1Q6ZN28 852 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 MICALCLQ6ZW33 695 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 GLT6D1Q7Z4J2 308 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 YTHDF3Q7Z739 585 aaKnown RBP9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 CMC1Q7Z7K0 106 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 ANKS4BQ8N8V4 417 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 CCDC197Q8NCU1 140 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 AGBL5Q8NDL9 886 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 TMIEQ8NEW7 156 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 OR13C4Q8NGS5 318 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 OR2A12Q8NGT7 310 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 OR6Y1Q8NGX8 325 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 OR4L1Q8NH43 312 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 GRIN3AQ8TCU5 1115 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 ZNF641Q96N77 438 aaPredicted RBP9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 PAIP2Q9BPZ3 127 aaKnown RBP9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 C1QTNF2Q9BXJ5 285 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 HDAC8Q9BY41 377 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 PITPNM3Q9BZ71 974 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 CATSPERZQ9NTU4 200 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 FGFR1OP2Q9NVK5 253 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 INTS10Q9NVR2 710 aaKnown RBP9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 IL17CQ9P0M4 197 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 MARCH4Q9P2E8 410 aaPredicted RBP9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 FADS3Q9Y5Q0 445 aa9.32□□□□□ -0.92
SOX9-AS1-201ENST00000412640 A0A087X1B8 175 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 CDC14CA4D256 554 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 ANKUB1A6NFN9 424 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 AURKAO14965 403 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 POP4O95707 220 aaKnown RBP9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 PIRTP0C851 137 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 ADRB3P13945 408 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 STMN1P16949 149 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 CD9P21926 228 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 SERPINA4P29622 427 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 HMGCLP35914 325 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 BLKP51451 505 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 SUOXP51687 545 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 STC1P52823 247 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 ADARP55265 1226 aaKnown RBP9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 TAS2R39P59534 338 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 ZRSR2Q15696 482 aaKnown RBP9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 ALG11Q2TAA5 492 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 ATG16L1Q676U5 607 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 CNSTQ6PJW8 725 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 ZNF438Q7Z4V0 828 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 SPATA21Q7Z572 469 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 SDCCAG8Q86SQ7 713 aaPredicted RBP9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 CAMK1DQ8IU85 385 aa9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 CBARPQ8N350 705 aaPredicted RBP9.31□□□□□ -0.92
SOX9-AS1-201ENST00000412640 FAM46DQ8NEK8 389 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms