RNA–Protein interactions for RNA: ENST00000411651.6

SUMO3-204, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-204ENST00000411651 DPY30Q9C005 99 aa19.68■□□□□ 0.74
SUMO3-204ENST00000411651 ZCCHC2Q9C0B9 1178 aaKnown RBP19.68■□□□□ 0.74
SUMO3-204ENST00000411651 ELOVL6Q9H5J4 265 aa19.68■□□□□ 0.74
SUMO3-204ENST00000411651 GEMIN8Q9NWZ8 242 aaKnown RBP19.68■□□□□ 0.74
SUMO3-204ENST00000411651 GDE1Q9NZC3 331 aa19.68■□□□□ 0.74
SUMO3-204ENST00000411651 DEC1Q9P2X7 70 aa19.68■□□□□ 0.74
SUMO3-204ENST00000411651 MAGEL2Q9UJ55 1249 aa19.68■□□□□ 0.74
SUMO3-204ENST00000411651 ZNF839A8K0R7 811 aa19.67■□□□□ 0.74
SUMO3-204ENST00000411651 SEC22BO75396 215 aa19.67■□□□□ 0.74
SUMO3-204ENST00000411651 UBTFL6P0CB48 400 aaPredicted RBP19.67■□□□□ 0.74
SUMO3-204ENST00000411651 CHN2P52757 468 aa19.67■□□□□ 0.74
SUMO3-204ENST00000411651 DUSP6Q16828 381 aa19.67■□□□□ 0.74
SUMO3-204ENST00000411651 GAB4Q2WGN9 574 aa19.67■□□□□ 0.74
SUMO3-204ENST00000411651 RABL3Q5HYI8 236 aa19.67■□□□□ 0.74
SUMO3-204ENST00000411651 NEK5Q6P3R8 708 aa19.67■□□□□ 0.74
SUMO3-204ENST00000411651 SLC2A7Q6PXP3 512 aa19.67■□□□□ 0.74
SUMO3-204ENST00000411651 UGT2A3Q6UWM9 527 aa19.67■□□□□ 0.74
SUMO3-204ENST00000411651 CMTM7Q96FZ5 175 aa19.67■□□□□ 0.74
SUMO3-204ENST00000411651 PPP1R16AQ96I34 528 aa19.67■□□□□ 0.74
SUMO3-204ENST00000411651 SH3GL1Q99961 368 aa19.67■□□□□ 0.74
SUMO3-204ENST00000411651 ACPTQ9BZG2 426 aa19.67■□□□□ 0.74
SUMO3-204ENST00000411651 INTS7Q9NVH2 962 aaKnown RBP19.67■□□□□ 0.74
SUMO3-204ENST00000411651 AP4B1Q9Y6B7 739 aa19.67■□□□□ 0.74
SUMO3-204ENST00000411651 MKI67P46013 3256 aaKnown RBP19.67■□□□□ 0.74
SUMO3-204ENST00000411651 KIF26AQ9ULI4 1882 aaPredicted RBP19.67■□□□□ 0.74
SUMO3-204ENST00000411651 TCRBV5S2A0A599 114 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 CATP04040 527 aaKnown RBP19.66■□□□□ 0.74
SUMO3-204ENST00000411651 JUPP14923 745 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 MAP4P27816 1152 aaKnown RBP19.66■□□□□ 0.74
SUMO3-204ENST00000411651 DPTQ07507 201 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 TMEM115Q12893 351 aaPredicted RBP19.66■□□□□ 0.74
SUMO3-204ENST00000411651 ACOX1Q15067 660 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 SYTL3Q4VX76 610 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 FAM78AQ5JUQ0 283 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 C9orf64Q5T6V5 341 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 INTS11Q5TA45 600 aaKnown RBP19.66■□□□□ 0.74
SUMO3-204ENST00000411651 FBXL19Q6PCT2 694 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 MSANTD1Q6ZTZ1 278 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 SLC22A15Q8IZD6 547 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 ADGRG5Q8IZF4 528 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 ST13P4Q8IZP2 240 aaPredicted RBP19.66■□□□□ 0.74
SUMO3-204ENST00000411651 RASGEF1AQ8N9B8 481 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 SELENOMQ8WWX9 145 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 POP5Q969H6 163 aaKnown RBP19.66■□□□□ 0.74
SUMO3-204ENST00000411651 FCRL1Q96LA6 429 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 CCDC115Q96NT0 180 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 FAM192AQ9GZU8 254 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 LMAN2LQ9H0V9 348 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 AGPAT4Q9NRZ5 378 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 FARSBQ9NSD9 589 aaKnown RBP19.66■□□□□ 0.74
SUMO3-204ENST00000411651 KPNA3O00505 521 aaPredicted RBP19.66■□□□□ 0.74
SUMO3-204ENST00000411651 AREL1O15033 823 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 MTX2O75431 263 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 PDYNP01213 254 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 C7P10643 843 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 EN2P19622 333 aaPredicted RBP19.66■□□□□ 0.74
SUMO3-204ENST00000411651 LBX1P52954 281 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 CLDN8P56748 225 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 PFN3P60673 137 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 HMGCS1Q01581 520 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 CSTF3Q12996 717 aaKnown RBP19.66■□□□□ 0.74
SUMO3-204ENST00000411651 ZNF658BQ4V348 819 aaPredicted RBP19.66■□□□□ 0.74
SUMO3-204ENST00000411651 TBCELQ5QJ74 424 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 SPPL2CQ8IUH8 684 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 LIX1Q8N485 282 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 TRPV3Q8NET8 790 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 TNIP2Q8NFZ5 429 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 OSBPL11Q9BXB4 747 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 OSBPL6Q9BZF3 934 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 DZANK1Q9NVP4 752 aa19.66■□□□□ 0.74
SUMO3-204ENST00000411651 PRRT4C9JH25 899 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 SPINT1O43278 529 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 CA3P07451 260 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 FASP25445 335 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 VIPR2P41587 438 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 PLOD1Q02809 727 aaPredicted RBP19.65■□□□□ 0.74
SUMO3-204ENST00000411651 MAP7Q14244 749 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 GRIN2CQ14957 1233 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 CPSF6Q16630 551 aaKnown RBP eCLIP19.65■□□□□ 0.74
SUMO3-204ENST00000411651 FRG2Q64ET8 278 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 HMBOX1Q6NT76 420 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 PPP4R4Q6NUP7 873 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 GTF2H4Q92759 462 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 NXPE3Q969Y0 559 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 TESCQ96BS2 214 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 ZNF514Q96K75 400 aaPredicted RBP19.65■□□□□ 0.74
SUMO3-204ENST00000411651 TRAPPC9Q96Q05 1148 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 FRG2BQ96QU4 278 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 TMEM245Q9H330 911 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 MTG2Q9H4K7 406 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 THG1LQ9NWX6 298 aaKnown RBP19.65■□□□□ 0.74
SUMO3-204ENST00000411651 SLAMF8Q9P0V8 285 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 GMPR2Q9P2T1 348 aaKnown RBP19.65■□□□□ 0.74
SUMO3-204ENST00000411651 EGFL7Q9UHF1 273 aa19.65■□□□□ 0.74
SUMO3-204ENST00000411651 TSPAN6O43657 245 aa19.64■□□□□ 0.74
SUMO3-204ENST00000411651 PGRP06401 933 aa19.64■□□□□ 0.74
SUMO3-204ENST00000411651 LINGO3P0C6S8 592 aa19.64■□□□□ 0.74
SUMO3-204ENST00000411651 BCKDHAP12694 445 aa19.64■□□□□ 0.74
SUMO3-204ENST00000411651 HSD3B1P14060 373 aa19.64■□□□□ 0.74
SUMO3-204ENST00000411651 HSD3B2P26439 372 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms