RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SNTG1Q9NSN8 517 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 CACNG4Q9UBN1 327 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 LGR5O75473 907 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 ZNF35P13682 527 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 PTNP21246 168 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 PTX3P26022 381 aaPredicted RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 S100A10P60903 97 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 MRPL49Q13405 166 aaKnown RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 FIGNQ5HY92 759 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 NAIF1Q69YI7 327 aaPredicted RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 SHQ1Q6PI26 577 aaKnown RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 SDR16C5Q8N3Y7 309 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 TOP6BLQ8N6T0 577 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 CYP2S1Q96SQ9 504 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 GPR21Q99679 349 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 NAV1Q8NEY1 1877 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 PLOD2O00469 737 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 KCNJ13O60928 360 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 UGT2B11O75310 529 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 SLC1A2P43004 574 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 CASP7P55210 303 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 ECT2LQ008S8 904 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 PDCD4Q53EL6 469 aaKnown RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 VSTM1Q6UX27 236 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 REM2Q8IYK8 340 aaPredicted RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 SPPL2BQ8TCT7 592 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 RCN3Q96D15 328 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 ZNF670Q9BS34 389 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 TTYH2Q9BSA4 534 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 WASF3Q9UPY6 502 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 hCG_2039718K7EN88 272 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 KAT7O95251 611 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 MSL3P1P0C860 447 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 HOXB2P14652 356 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 NELFEP18615 380 aaKnown RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 KIR3DL1P43629 444 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 CCR3P51677 355 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 E2F2Q14209 437 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 AAK1Q2M2I8 961 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 PLCZ1Q86YW0 608 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 RASSF5Q8WWW0 418 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 CCNL2Q96S94 520 aaPredicted RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 GPATCH1Q9BRR8 931 aaKnown RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 FUT8Q9BYC5 575 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 BCO2Q9BYV7 579 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 GDF3Q9NR23 364 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 CCDC59Q9P031 241 aaKnown RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 TESMINQ9Y4I5 508 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 FAM240BA0A1B0GVZ2 78 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 PITPNM1O00562 1244 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 IPO13O94829 963 aaKnown RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 CD2P06729 351 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 GRIK2Q13002 908 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 DPYSQ14117 519 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 TNFAIP8L2Q6P589 184 aaPredicted RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 MAPK15Q8TD08 544 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 PLD4Q96BZ4 506 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 NPLQ9BXD5 320 aaPredicted RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 PRDM16Q9HAZ2 1276 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 CDC123O75794 336 aaPredicted RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 MYCLP1P12525 358 aaPredicted RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 PBX3P40426 434 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 RPL7AP62424 266 aaKnown RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 MPP1Q00013 466 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 NKAPLQ5M9Q1 402 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 SPPL2CQ8IUH8 684 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 RFT1Q96AA3 541 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 RBCK1Q9BYM8 510 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 MED28Q9H204 178 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 IKZF4Q9H2S9 585 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 TDP1Q9NUW8 608 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 UBIAD1Q9Y5Z9 338 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 AGLP35573 1532 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 LIASO43766 372 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 VNN2O95498 520 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 THRBP10828 461 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 PSMA1P25786 263 aaKnown RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 PLP2Q04941 152 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 RNASEH2BQ5TBB1 312 aaKnown RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 OR7D4Q8NG98 312 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 OR4E2Q8NGC2 313 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 SLC6A15Q9H2J7 730 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 C19orf25Q9UFG5 118 aaPredicted RBP11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 MEMO1Q9Y316 297 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 COL1A2P08123 1366 aa11.03□□□□□ -0.64
PRPF40A-202ENST00000410080 C5orf60A6NFR6 353 aa11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 GRXCR1A8MXD5 290 aa11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 J3QRK9 145 aa11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 CHRM5P08912 532 aaPredicted RBP11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 CSKP41240 450 aa11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 ZNF844Q08AG5 666 aa11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 TARDBPQ13148 414 aaKnown RBP eCLIP11.02□□□□□ -0.642e-7■■■■□ 24.5
PRPF40A-202ENST00000410080 MCFD2Q8NI22 146 aa11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 LNX1Q8TBB1 728 aaPredicted RBP11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 EPS8L1Q8TE68 723 aa11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 POF1BQ8WVV4 589 aa11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 ZBED6CLQ96FA7 236 aaPredicted RBP11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 H3BQF6 201 aa11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 ACSL1P33121 698 aa11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 CDK9P50750 372 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms