RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 GPR174Q9BXC1 333 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 ANKRD60Q9BZ19 345 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 MRPL40Q9NQ50 206 aaKnown RBP16.52■□□□□ 0.23
GCFC2-202ENST00000409857 EGFL7Q9UHF1 273 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 SPAG17Q6Q759 2223 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 TMX2-CTNND1H3BSU7 103 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 PCDH8O95206 1070 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 LHCGRP22888 699 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 RPL6Q02878 288 aaKnown RBP16.51■□□□□ 0.23
GCFC2-202ENST00000409857 ARHGEF7Q14155 803 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 SAMD4BQ5PRF9 694 aaKnown RBP16.51■□□□□ 0.23
GCFC2-202ENST00000409857 DUS1LQ6P1R4 473 aaKnown RBP16.51■□□□□ 0.23
GCFC2-202ENST00000409857 C8orf82Q6P1X6 216 aaPredicted RBP16.51■□□□□ 0.23
GCFC2-202ENST00000409857 ZC3H14Q6PJT7 736 aaKnown RBP16.51■□□□□ 0.23
GCFC2-202ENST00000409857 LIPIQ6XZB0 460 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 CPNE9Q8IYJ1 553 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 SLC25A23Q9BV35 468 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 GSTO2Q9H4Y5 243 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 EML4Q9HC35 981 aaKnown RBP16.51■□□□□ 0.23
GCFC2-202ENST00000409857 KCTD5Q9NXV2 234 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 ZNF711Q9Y462 761 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 PPP6CO00743 305 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 DLGAP1O14490 977 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 FOXD2O60548 495 aaPredicted RBP16.51■□□□□ 0.23
GCFC2-202ENST00000409857 SEC24DO94855 1032 aaPredicted RBP16.51■□□□□ 0.23
GCFC2-202ENST00000409857 ELFN1P0C7U0 828 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 BCKDHBP21953 392 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 CDH13P55290 713 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 LRRC66Q68CR7 880 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 KLHL35Q6PF15 583 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 CBR4Q8N4T8 237 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 BRSK1Q8TDC3 778 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 SNRNP27Q8WVK2 155 aaKnown RBP16.51■□□□□ 0.23
GCFC2-202ENST00000409857 TFAP2CQ92754 450 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 FOXJ1Q92949 421 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 C1QTNF2Q9BXJ5 285 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 C6orf106Q9H6K1 298 aaPredicted RBP16.51■□□□□ 0.23
GCFC2-202ENST00000409857 ALG9Q9H6U8 611 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 CLK4Q9HAZ1 481 aaKnown RBP16.51■□□□□ 0.23
GCFC2-202ENST00000409857 SMOXQ9NWM0 555 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 ZFR2Q9UPR6 939 aaKnown RBP16.51■□□□□ 0.23
GCFC2-202ENST00000409857 INVSQ9Y283 1065 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 SPO11Q9Y5K1 396 aa16.51■□□□□ 0.23
GCFC2-202ENST00000409857 A0A1W2PQU0 124 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 METTL12A8MUP2 240 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 SUPT7LO94864 414 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 CLIC3O95833 236 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 LTA4HP09960 611 aaKnown RBP16.5■□□□□ 0.23
GCFC2-202ENST00000409857 POLD2P49005 469 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 ZNF284Q2VY69 593 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 AGAP9Q5VTM2 703 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 FAM45BPQ6NSW5 357 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 PPP4R4Q6NUP7 873 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 TMEM207Q6UWW9 146 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 LARP4Q71RC2 724 aaKnown RBP eCLIP16.5■□□□□ 0.23
GCFC2-202ENST00000409857 SPPL2CQ8IUH8 684 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 EPHX4Q8IUS5 362 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 ZNF786Q8N393 782 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 PRSS33Q8NF86 280 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 FAM45AQ8TCE6 357 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 EXT2Q93063 718 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 DUS3LQ96G46 650 aaKnown RBP16.5■□□□□ 0.23
GCFC2-202ENST00000409857 SMIM14Q96QK8 99 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 ZFYVE1Q9HBF4 777 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 C1orf232A0A0U1RR37 186 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 NME4O00746 187 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 IGHV4-34P06331 123 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 STC1P52823 247 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 PTSQ03393 145 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 TCF15Q12870 199 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 CAPRIN1Q14444 709 aaKnown RBP16.5■□□□□ 0.23
GCFC2-202ENST00000409857 TAF1AQ15573 450 aaPredicted RBP16.5■□□□□ 0.23
GCFC2-202ENST00000409857 PMS2CLQ68D20 193 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 TSPAN33Q86UF1 283 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 PIM3Q86V86 326 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 CLVS1Q8IUQ0 354 aaPredicted RBP16.5■□□□□ 0.23
GCFC2-202ENST00000409857 ANKFN1Q8N957 763 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 FAR2Q96K12 515 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 COQ10AQ96MF6 247 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 EFHD1Q9BUP0 239 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 WRAP53Q9BUR4 548 aaKnown RBP16.5■□□□□ 0.23
GCFC2-202ENST00000409857 MAP10Q9P2G4 905 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 CIDEBQ9UHD4 219 aa16.5■□□□□ 0.23
GCFC2-202ENST00000409857 NR5A2O00482 541 aa16.49■□□□□ 0.23
GCFC2-202ENST00000409857 C6P13671 934 aa16.49■□□□□ 0.23
GCFC2-202ENST00000409857 CHRM3P20309 590 aa16.49■□□□□ 0.23
GCFC2-202ENST00000409857 SOX11P35716 441 aa16.49■□□□□ 0.23
GCFC2-202ENST00000409857 HMGCLP35914 325 aa16.49■□□□□ 0.23
GCFC2-202ENST00000409857 KPNA2P52292 529 aaKnown RBP16.49■□□□□ 0.23
GCFC2-202ENST00000409857 PPP2CBP62714 309 aa16.49■□□□□ 0.23
GCFC2-202ENST00000409857 PPP2CAP67775 309 aa16.49■□□□□ 0.23
GCFC2-202ENST00000409857 PTPRRQ15256 657 aa16.49■□□□□ 0.23
GCFC2-202ENST00000409857 VPS26BQ4G0F5 336 aa16.49■□□□□ 0.23
GCFC2-202ENST00000409857 KIAA0930Q6ICG6 404 aaPredicted RBP16.49■□□□□ 0.23
GCFC2-202ENST00000409857 CYP2U1Q7Z449 544 aa16.49■□□□□ 0.23
GCFC2-202ENST00000409857 TTC30BQ8N4P2 665 aa16.49■□□□□ 0.23
GCFC2-202ENST00000409857 AFAP1L2Q8N4X5 818 aa16.49■□□□□ 0.23
GCFC2-202ENST00000409857 DCUN1D5Q9BTE7 237 aa16.49■□□□□ 0.23
GCFC2-202ENST00000409857 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.49■□□□□ 0.23
GCFC2-202ENST00000409857 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms