RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 SFTPA2Q8IWL1 248 aa16.37■□□□□ 0.21
SSB-202ENST00000409333 LMNTD1Q8N9Z9 388 aa16.37■□□□□ 0.21
SSB-202ENST00000409333 FBXL8Q96CD0 374 aa16.37■□□□□ 0.21
SSB-202ENST00000409333 FERD3LQ96RJ6 166 aa16.37■□□□□ 0.21
SSB-202ENST00000409333 SHCBP1LQ9BZQ2 653 aa16.37■□□□□ 0.21
SSB-202ENST00000409333 FAM107BQ9H098 131 aa16.37■□□□□ 0.21
SSB-202ENST00000409333 ATG10Q9H0Y0 220 aa16.37■□□□□ 0.21
SSB-202ENST00000409333 STOX2Q9P2F5 926 aaPredicted RBP16.37■□□□□ 0.21
SSB-202ENST00000409333 SUSD2Q9UGT4 822 aa16.37■□□□□ 0.21
SSB-202ENST00000409333 TDRKHQ9Y2W6 561 aaKnown RBP16.37■□□□□ 0.21
SSB-202ENST00000409333 HEATR5BQ9P2D3 2071 aa16.37■□□□□ 0.21
SSB-202ENST00000409333 TRBV23OR9-2A0A075B6M9 112 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 SDC3O75056 442 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 HSPA4LO95757 839 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 RPN2P04844 631 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 HNMTP50135 292 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 ARL13AQ5H913 290 aaPredicted RBP16.36■□□□□ 0.21
SSB-202ENST00000409333 ANKS6Q68DC2 871 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 TBC1D21Q8IYX1 336 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 PPFIBP2Q8ND30 876 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 OR9A1PQ8NGU1 263 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 MAGEC3Q8TD91 643 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 LMX1AQ8TE12 382 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 ZNF483Q8TF39 744 aaPredicted RBP16.36■□□□□ 0.21
SSB-202ENST00000409333 PATE1Q8WXA2 126 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 RAD51AP1Q96B01 352 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 PYCR2Q96C36 320 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 CNDP1Q96KN2 507 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 C7orf26Q96N11 449 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 CD244Q9BZW8 370 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 ZNF624Q9P2J8 865 aaPredicted RBP16.36■□□□□ 0.21
SSB-202ENST00000409333 ARID1BQ8NFD5 2236 aaPredicted RBP16.36■□□□□ 0.21
SSB-202ENST00000409333 FRYLO94915 3013 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 SRRM3A6NNA2 597 aaPredicted RBP16.36■□□□□ 0.21
SSB-202ENST00000409333 PPP6CO00743 305 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 CCNT2O60583 730 aaKnown RBP16.36■□□□□ 0.21
SSB-202ENST00000409333 DRD4P21917 467 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 GGT5P36269 586 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 SLC6A12P48065 614 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 HNRNPKP61978 463 aaKnown RBP eCLIP16.36■□□□□ 0.21
SSB-202ENST00000409333 CLCQ05315 142 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 PTCHD3Q3KNS1 767 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 CGB2Q6NT52 195 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 TTC23LQ6PF05 361 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 AGTRAPQ6RW13 159 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 TCAIMQ8N3R3 496 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 ZNF548Q8NEK5 533 aaPredicted RBP16.36■□□□□ 0.21
SSB-202ENST00000409333 PPP4R1Q8TF05 950 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 ZNF480Q8WV37 535 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 IL17FQ96PD4 163 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 ZBTB26Q9HCK0 441 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 SEMA4BQ9NPR2 832 aaPredicted RBP16.36■□□□□ 0.21
SSB-202ENST00000409333 FSCN3Q9NQT6 498 aa16.36■□□□□ 0.21
SSB-202ENST00000409333 TNPO3Q9Y5L0 923 aaKnown RBP16.36■□□□□ 0.21
SSB-202ENST00000409333 GOLGA4Q13439 2230 aaKnown RBP16.35■□□□□ 0.21
SSB-202ENST00000409333 UBFD1O14562 309 aaKnown RBP16.35■□□□□ 0.21
SSB-202ENST00000409333 STK16O75716 305 aa16.35■□□□□ 0.21
SSB-202ENST00000409333 ELOCQ15369 112 aa16.35■□□□□ 0.21
SSB-202ENST00000409333 FAM219BQ5XKK7 198 aa16.35■□□□□ 0.21
SSB-202ENST00000409333 AGR3Q8TD06 166 aa16.35■□□□□ 0.21
SSB-202ENST00000409333 TRPC4APQ8TEL6 797 aa16.35■□□□□ 0.21
SSB-202ENST00000409333 MENTQ9BUN1 341 aa16.35■□□□□ 0.21
SSB-202ENST00000409333 ERVMER34-1Q9H9K5 563 aa16.35■□□□□ 0.21
SSB-202ENST00000409333 PSD3Q9NYI0 1048 aa16.35■□□□□ 0.21
SSB-202ENST00000409333 SPASTQ9UBP0 616 aa16.35■□□□□ 0.21
SSB-202ENST00000409333 R4GN57 208 aa16.35■□□□□ 0.21
SSB-202ENST00000409333 A0A1B0GTL3 188 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 PATE3B3GLJ2 98 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 AQP9O43315 295 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 MPSTP25325 297 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 SERPINB5P36952 375 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 SLC19A1P41440 591 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 SF3A3Q12874 501 aaKnown RBP eCLIP16.34■□□□□ 0.21
SSB-202ENST00000409333 GTF2H2Q13888 395 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 KRT33BQ14525 404 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 GTF2H2CQ6P1K8 395 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 IYDQ6PHW0 289 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 GOLGA7Q7Z5G4 137 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 NAGSQ8N159 534 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 ZNF781Q8N8C0 355 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 FAM46DQ8NEK8 389 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 THOC1Q96FV9 657 aaKnown RBP16.34■□□□□ 0.21
SSB-202ENST00000409333 MED8Q96G25 268 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 CAMK1GQ96NX5 476 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 MVB12BQ9H7P6 319 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 UCKL1Q9NWZ5 548 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 OPTCQ9UBM4 332 aa16.34■□□□□ 0.21
SSB-202ENST00000409333 MARCOQ9UEW3 520 aaPredicted RBP16.34■□□□□ 0.21
SSB-202ENST00000409333 B4DGG1 531 aa16.33■□□□□ 0.21
SSB-202ENST00000409333 K7EPI3 171 aa16.33■□□□□ 0.21
SSB-202ENST00000409333 PIAS2O75928 621 aa16.33■□□□□ 0.21
SSB-202ENST00000409333 WDR47O94967 919 aa16.33■□□□□ 0.21
SSB-202ENST00000409333 CFIP05156 583 aa16.33■□□□□ 0.21
SSB-202ENST00000409333 TBPL1P62380 186 aa16.33■□□□□ 0.21
SSB-202ENST00000409333 GRIK2Q13002 908 aa16.33■□□□□ 0.21
SSB-202ENST00000409333 NAE1Q13564 534 aa16.33■□□□□ 0.21
SSB-202ENST00000409333 FASTKQ14296 549 aaKnown RBP16.33■□□□□ 0.21
SSB-202ENST00000409333 CPLX4Q7Z7G2 160 aa16.33■□□□□ 0.21
SSB-202ENST00000409333 CUZD1Q86UP6 607 aa16.33■□□□□ 0.21
SSB-202ENST00000409333 GKN2Q86XP6 184 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms