RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 LRRC38Q5VT99 294 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 PRAMEF17Q5VTA0 474 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 C1orf189Q5VU69 101 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 E4F1Q66K89 784 aaPredicted RBP7.48□□□□□ -1.21
LSM5-202ENST00000409292 RHBDD2Q6NTF9 364 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 SPESP1Q6UW49 350 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 GDF7Q7Z4P5 450 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 KCNMB4Q86W47 210 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 TMTC1Q8IUR5 882 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 MCEMP1Q8IX19 187 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 C19orf47Q8N9M1 422 aaKnown RBP7.48□□□□□ -1.21
LSM5-202ENST00000409292 OR52E1Q8NGJ3 308 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 SUN3Q8TAQ9 357 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 FAR1Q8WVX9 515 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 EDARADDQ8WWZ3 215 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 RAPGEF5Q92565 580 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 TFGQ92734 400 aaPredicted RBP7.48□□□□□ -1.21
LSM5-202ENST00000409292 SLC22A18Q96BI1 424 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 TADA1Q96BN2 335 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 MAGEB10Q96LZ2 347 aaPredicted RBP7.48□□□□□ -1.21
LSM5-202ENST00000409292 RMDN2Q96LZ7 410 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 FCRL5Q96RD9 977 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 TTC1Q99614 292 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 ZNF552Q9H707 407 aaPredicted RBP7.48□□□□□ -1.21
LSM5-202ENST00000409292 OLAHQ9NV23 265 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 INTS7Q9NVH2 962 aaKnown RBP7.48□□□□□ -1.21
LSM5-202ENST00000409292 IL1RAPL1Q9NZN1 696 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 TMPRSS11EQ9UL52 423 aa7.48□□□□□ -1.21
LSM5-202ENST00000409292 AAR2Q9Y312 384 aaKnown RBP7.48□□□□□ -1.21
LSM5-202ENST00000409292 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.48□□□□□ -1.21
LSM5-202ENST00000409292 PIKFYVEQ9Y2I7 2098 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 POLEQ07864 2286 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 A0A0J9YY10 115 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 HACD1B0YJ81 288 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 ISM1B1AKI9 464 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 BTN3A1O00481 513 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 BUD23O43709 281 aaKnown RBP7.47□□□□□ -1.21
LSM5-202ENST00000409292 SPOPO43791 374 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 AKR1B10O60218 316 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 KLF7O75840 302 aaPredicted RBP7.47□□□□□ -1.21
LSM5-202ENST00000409292 MLYCDO95822 493 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 ALBP02768 609 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 RPN2P04844 631 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 CAPN1P07384 714 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 TMEM253P0C7T8 217 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 CBSLP0DN79 551 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 ARAFP10398 606 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 TNNT1P13805 278 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 ATP1B2P14415 290 aaPredicted RBP7.47□□□□□ -1.21
LSM5-202ENST00000409292 COX6B1P14854 86 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 MMP11P24347 488 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 CTNNA2P26232 953 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 PTGER4P35408 488 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 CBSP35520 551 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 CETN2P41208 172 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 CARSP49589 748 aaKnown RBP7.47□□□□□ -1.21
LSM5-202ENST00000409292 PRLHRP49683 370 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 UBASH3AP57075 661 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 AP2B1P63010 937 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 PLOD1Q02809 727 aaPredicted RBP7.47□□□□□ -1.21
LSM5-202ENST00000409292 ART3Q13508 389 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 NR1I3Q14994 352 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 RBBP7Q16576 425 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 SLC5A12Q1EHB4 618 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 TUBB8Q3ZCM7 444 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 SYTL3Q4VX76 610 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 ARSJQ5FYB0 599 aaPredicted RBP7.47□□□□□ -1.21
LSM5-202ENST00000409292 ZC3H12BQ5HYM0 836 aaKnown RBP7.47□□□□□ -1.21
LSM5-202ENST00000409292 YOD1Q5VVQ6 348 aaPredicted RBP7.47□□□□□ -1.21
LSM5-202ENST00000409292 PRAMEF13Q5VWM6 474 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 LCN10Q6JVE6 187 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 ISLR2Q6UXK2 745 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 CDHR3Q6ZTQ4 885 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 SNX20Q7Z614 316 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 ZC3H18Q86VM9 953 aaKnown RBP7.47□□□□□ -1.21
LSM5-202ENST00000409292 NXPE1Q8N323 547 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 RAB42Q8N4Z0 105 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 ZNF655Q8N720 491 aaPredicted RBP7.47□□□□□ -1.21
LSM5-202ENST00000409292 TTC29Q8NA56 475 aaPredicted RBP7.47□□□□□ -1.21
LSM5-202ENST00000409292 OR4K2Q8NGD2 314 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 CCDC110Q8TBZ0 833 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 GRHL3Q8TE85 626 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 FKBP10Q96AY3 582 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 HAUS1Q96CS2 278 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 OLFM3Q96PB7 478 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 C19orf43Q9BQ61 176 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 HGH1Q9BTY7 390 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 TSSK1BQ9BXA7 367 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 CHRNA10Q9GZZ6 450 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 LHPPQ9H008 270 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 KLHL25Q9H0H3 589 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 COG4Q9H9E3 785 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 OR6C2Q9NZP2 312 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.47□□□□□ -1.21
LSM5-202ENST00000409292 FEZ2Q9UHY8 353 aaPredicted RBP7.47□□□□□ -1.21
LSM5-202ENST00000409292 FBXL4Q9UKA2 621 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 CAPN11Q9UMQ6 739 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 NOVA2Q9UNW9 492 aaKnown RBP7.47□□□□□ -1.21
LSM5-202ENST00000409292 PLCL2Q9UPR0 1127 aa7.47□□□□□ -1.21
LSM5-202ENST00000409292 ASF1AQ9Y294 204 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms