RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 CFAP99D6REC4 459 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 KCNN4O15554 427 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 ALBP02768 609 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 KRT1P04264 644 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 SERPING1P05155 500 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 PIM1P11309 404 aaPredicted RBP16.01■□□□□ 0.15
CHMP3-203ENST00000409225 SHMT2P34897 504 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 PBX1P40424 430 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 XIAPP98170 497 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 MESDQ14696 234 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 SLC5A12Q1EHB4 618 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 ZNF658BQ4V348 819 aaPredicted RBP16.01■□□□□ 0.15
CHMP3-203ENST00000409225 FAM20CQ8IXL6 584 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 TFB1MQ8WVM0 346 aaKnown RBP16.01■□□□□ 0.15
CHMP3-203ENST00000409225 RNF25Q96BH1 459 aaPredicted RBP16.01■□□□□ 0.15
CHMP3-203ENST00000409225 ULK4Q96C45 1275 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 VPS50Q96JG6 964 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 NAP1L5Q96NT1 182 aaPredicted RBP16.01■□□□□ 0.15
CHMP3-203ENST00000409225 FCRL5Q96RD9 977 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 COPS8Q99627 209 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 FSD1LQ9BXM9 530 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 ZNF160Q9HCG1 818 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 EURLQ9NYK6 297 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 UVRAGQ9P2Y5 699 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 SAE1Q9UBE0 346 aaPredicted RBP16.01■□□□□ 0.15
CHMP3-203ENST00000409225 KLHL20Q9Y2M5 609 aa16.01■□□□□ 0.15
CHMP3-203ENST00000409225 TRAV17A0A0B4J275 112 aa16■□□□□ 0.15
CHMP3-203ENST00000409225 DYTNA2CJ06 578 aa16■□□□□ 0.15
CHMP3-203ENST00000409225 C19orf84I3L1E1 186 aa16■□□□□ 0.15
CHMP3-203ENST00000409225 F10P00742 488 aa16■□□□□ 0.15
CHMP3-203ENST00000409225 AGTP01019 485 aa16■□□□□ 0.15
CHMP3-203ENST00000409225 GCGRP47871 477 aa16■□□□□ 0.15
CHMP3-203ENST00000409225 ARSFP54793 590 aa16■□□□□ 0.15
CHMP3-203ENST00000409225 MPP3Q13368 585 aa16■□□□□ 0.15
CHMP3-203ENST00000409225 TAF1AQ15573 450 aaPredicted RBP16■□□□□ 0.15
CHMP3-203ENST00000409225 INAQ16352 499 aa16■□□□□ 0.15
CHMP3-203ENST00000409225 PID1Q7Z2X4 250 aa16■□□□□ 0.15
CHMP3-203ENST00000409225 ZNF567Q8N184 647 aa16■□□□□ 0.15
CHMP3-203ENST00000409225 METTL27Q8N6F8 245 aaPredicted RBP16■□□□□ 0.15
CHMP3-203ENST00000409225 FICDQ9BVA6 458 aa16■□□□□ 0.15
CHMP3-203ENST00000409225 SLC26A1Q9H2B4 701 aa16■□□□□ 0.15
CHMP3-203ENST00000409225 VPS37BQ9H9H4 285 aa16■□□□□ 0.15
CHMP3-203ENST00000409225 SEMA3GQ9NS98 782 aa16■□□□□ 0.15
CHMP3-203ENST00000409225 LMBRD1Q9NUN5 540 aa16■□□□□ 0.15
CHMP3-203ENST00000409225 SEC14L3Q9UDX4 400 aa16■□□□□ 0.15
CHMP3-203ENST00000409225 PLAGL1Q9UM63 463 aa16■□□□□ 0.15
CHMP3-203ENST00000409225 TDRKHQ9Y2W6 561 aaKnown RBP16■□□□□ 0.15
CHMP3-203ENST00000409225 ISM1B1AKI9 464 aa15.99■□□□□ 0.15
CHMP3-203ENST00000409225 DSCR3O14972 297 aa15.99■□□□□ 0.15
CHMP3-203ENST00000409225 ITGALP20701 1170 aa15.99■□□□□ 0.15
CHMP3-203ENST00000409225 MST1P26927 711 aa15.99■□□□□ 0.15
CHMP3-203ENST00000409225 TNFSF10P50591 281 aa15.99■□□□□ 0.15
CHMP3-203ENST00000409225 ADORA2A-AS1P86434 159 aa15.99■□□□□ 0.15
CHMP3-203ENST00000409225 RPA4Q13156 261 aa15.99■□□□□ 0.15
CHMP3-203ENST00000409225 XKRXQ6PP77 449 aa15.99■□□□□ 0.15
CHMP3-203ENST00000409225 VSIG1Q86XK7 387 aa15.99■□□□□ 0.15
CHMP3-203ENST00000409225 MCATQ8IVS2 390 aaKnown RBP15.99■□□□□ 0.15
CHMP3-203ENST00000409225 OR13C4Q8NGS5 318 aa15.99■□□□□ 0.15
CHMP3-203ENST00000409225 CCDC110Q8TBZ0 833 aa15.99■□□□□ 0.15
CHMP3-203ENST00000409225 PACSIN1Q9BY11 444 aa15.99■□□□□ 0.15
CHMP3-203ENST00000409225 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.99■□□□□ 0.15
CHMP3-203ENST00000409225 CUTCQ9NTM9 273 aa15.99■□□□□ 0.15
CHMP3-203ENST00000409225 PTGFRNQ9P2B2 879 aa15.99■□□□□ 0.15
CHMP3-203ENST00000409225 LCMT1Q9UIC8 334 aa15.99■□□□□ 0.15
CHMP3-203ENST00000409225 NXT1Q9UKK6 140 aaKnown RBP15.99■□□□□ 0.15
CHMP3-203ENST00000409225 ASF1AQ9Y294 204 aa15.99■□□□□ 0.15
CHMP3-203ENST00000409225 A0A1B0GTH6 734 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 AGAP14A8MT82 685 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 CCL22O00626 93 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 HPP00738 406 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 H2AFZP0C0S5 128 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 TPBGLP0DKB5 382 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 ACPPP15309 386 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 PECAM1P16284 738 aaPredicted RBP15.98■□□□□ 0.15
CHMP3-203ENST00000409225 CAPN3P20807 821 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 MAGP20916 626 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 MCM3P25205 808 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 PEBP1P30086 187 aaKnown RBP15.98■□□□□ 0.15
CHMP3-203ENST00000409225 OR1D4P47884 311 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 FANCCQ00597 558 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 RBPJQ06330 500 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 ODF2Q5BJF6 829 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 FIGNQ5HY92 759 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 MICALCLQ6ZW33 695 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 H2AFVQ71UI9 128 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 SNX20Q7Z614 316 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 KBTBD2Q8IY47 623 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 PRSS58Q8IYP2 241 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 DENND1AQ8TEH3 1009 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 HEXDCQ8WVB3 486 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 CTNNBL1Q8WYA6 563 aaPredicted RBP15.98■□□□□ 0.15
CHMP3-203ENST00000409225 SYN2Q92777 582 aaPredicted RBP15.98■□□□□ 0.15
CHMP3-203ENST00000409225 C8orf44Q96CB5 159 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 APOL2Q9BQE5 337 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 CRB3Q9BUF7 120 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 ZDHHC3Q9NYG2 299 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 OR6C2Q9NZP2 312 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 ABI3Q9P2A4 366 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 RSPH14Q9UHP6 348 aa15.98■□□□□ 0.15
CHMP3-203ENST00000409225 SNRNP200O75643 2136 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms