RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 GNPDA1P46926 289 aa18.47■□□□□ 0.55
USP39-202ENST00000409025 RFTN2Q52LD8 501 aaPredicted RBP18.47■□□□□ 0.55
USP39-202ENST00000409025 PRMT9Q6P2P2 845 aa18.47■□□□□ 0.55
USP39-202ENST00000409025 AGTRAPQ6RW13 159 aa18.47■□□□□ 0.55
USP39-202ENST00000409025 CYP20A1Q6UW02 462 aa18.47■□□□□ 0.55
USP39-202ENST00000409025 LRRC74BQ6ZQY2 392 aa18.47■□□□□ 0.55
USP39-202ENST00000409025 OR2T3Q8NH03 318 aa18.47■□□□□ 0.55
USP39-202ENST00000409025 EZH1Q92800 747 aaPredicted RBP18.47■□□□□ 0.55
USP39-202ENST00000409025 COX14Q96I36 57 aa18.47■□□□□ 0.55
USP39-202ENST00000409025 TEX37Q96LM6 180 aa18.47■□□□□ 0.55
USP39-202ENST00000409025 STOX2Q9P2F5 926 aaPredicted RBP18.47■□□□□ 0.55
USP39-202ENST00000409025 POLR3HQ9Y535 204 aaPredicted RBP18.47■□□□□ 0.55
USP39-202ENST00000409025 KCNE1BA0A087WTH5 132 aa18.46■□□□□ 0.55
USP39-202ENST00000409025 CCDC154A6NI56 674 aa18.46■□□□□ 0.55
USP39-202ENST00000409025 G6PDP11413 515 aa18.46■□□□□ 0.55
USP39-202ENST00000409025 NTSR1P30989 418 aa18.46■□□□□ 0.55
USP39-202ENST00000409025 RPS14P62263 151 aaKnown RBP18.46■□□□□ 0.55
USP39-202ENST00000409025 RPL38P63173 70 aaKnown RBP18.46■□□□□ 0.55
USP39-202ENST00000409025 PRKG2Q13237 762 aa18.46■□□□□ 0.55
USP39-202ENST00000409025 C2orf27AQ580R0 203 aa18.46■□□□□ 0.55
USP39-202ENST00000409025 SAMD4BQ5PRF9 694 aaKnown RBP18.46■□□□□ 0.55
USP39-202ENST00000409025 CRTC3Q6UUV7 619 aa18.46■□□□□ 0.55
USP39-202ENST00000409025 THOC6Q86W42 341 aaKnown RBP18.46■□□□□ 0.55
USP39-202ENST00000409025 RGL4Q8IZJ4 473 aa18.46■□□□□ 0.55
USP39-202ENST00000409025 HM13Q8TCT9 377 aa18.46■□□□□ 0.55
USP39-202ENST00000409025 PROKR1Q8TCW9 393 aa18.46■□□□□ 0.55
USP39-202ENST00000409025 SELENOMQ8WWX9 145 aa18.46■□□□□ 0.55
USP39-202ENST00000409025 FOXJ1Q92949 421 aa18.46■□□□□ 0.55
USP39-202ENST00000409025 ANKRD27Q96NW4 1050 aa18.46■□□□□ 0.55
USP39-202ENST00000409025 PKP4Q99569 1192 aa18.46■□□□□ 0.55
USP39-202ENST00000409025 ELOVL6Q9H5J4 265 aa18.46■□□□□ 0.55
USP39-202ENST00000409025 LRTM1Q9HBL6 345 aa18.46■□□□□ 0.55
USP39-202ENST00000409025 TMEM181Q9P2C4 612 aa18.46■□□□□ 0.55
USP39-202ENST00000409025 SUCOQ9UBS9 1254 aaKnown RBP18.46■□□□□ 0.55
USP39-202ENST00000409025 DYTNA2CJ06 578 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 RNASEH2AO75792 299 aaKnown RBP18.45■□□□□ 0.54
USP39-202ENST00000409025 MSX2P35548 267 aaPredicted RBP18.45■□□□□ 0.54
USP39-202ENST00000409025 HALP42357 657 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 ZFP36L2P47974 494 aaKnown RBP18.45■□□□□ 0.54
USP39-202ENST00000409025 HMGCS1Q01581 520 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 STARD3Q14849 445 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 AAK1Q2M2I8 961 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 CCSMST1Q4G0I0 132 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 KBTBD6Q86V97 674 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 HEATR4Q86WZ0 1026 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 ZNF547Q8IVP9 402 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 KLHDC8AQ8IYD2 350 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 FBXO15Q8NCQ5 510 aaPredicted RBP18.45■□□□□ 0.54
USP39-202ENST00000409025 OR2L2Q8NH16 312 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 MTFMTQ96DP5 389 aaKnown RBP18.45■□□□□ 0.54
USP39-202ENST00000409025 SLC45A3Q96JT2 553 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 IL1RL2Q9HB29 575 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 LEF1Q9UJU2 399 aaPredicted RBP18.45■□□□□ 0.54
USP39-202ENST00000409025 TMEM98Q9Y2Y6 226 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 RANBP2P49792 3224 aaKnown RBP18.45■□□□□ 0.54
USP39-202ENST00000409025 MGAT4DA6NG13 374 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 SEC22BO75396 215 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 EEDO75530 441 aaKnown RBP18.45■□□□□ 0.54
USP39-202ENST00000409025 BCAS2O75934 225 aaPredicted RBP18.45■□□□□ 0.54
USP39-202ENST00000409025 C1orf105O95561 183 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 PDYNP01213 254 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 TCN1P20061 433 aaPredicted RBP18.45■□□□□ 0.54
USP39-202ENST00000409025 CTHP32929 405 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 MS4A2Q01362 244 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 CHIT1Q13231 466 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 NAE1Q13564 534 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 AGERQ15109 404 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 WSCD2Q2TBF2 565 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 MAP7D1Q3KQU3 841 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 HABP4Q5JVS0 413 aaKnown RBP18.45■□□□□ 0.54
USP39-202ENST00000409025 TRMT11Q7Z4G4 463 aaKnown RBP18.45■□□□□ 0.54
USP39-202ENST00000409025 ZFAND4Q86XD8 727 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 MINDY1Q8N5J2 469 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 SMRP1Q8NCR6 262 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 PPFIBP2Q8ND30 876 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 GANCQ8TET4 914 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 NRG4Q8WWG1 115 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 ASB9Q96DX5 294 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 MED8Q96G25 268 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 GPATCH1Q9BRR8 931 aaKnown RBP18.45■□□□□ 0.54
USP39-202ENST00000409025 C1orf109Q9NX04 203 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 SERGEFQ9UGK8 458 aa18.45■□□□□ 0.54
USP39-202ENST00000409025 UGDHO60701 494 aa18.44■□□□□ 0.54
USP39-202ENST00000409025 IL12AP29459 219 aa18.44■□□□□ 0.54
USP39-202ENST00000409025 SLC7A2P52569 658 aa18.44■□□□□ 0.54
USP39-202ENST00000409025 CDK3Q00526 305 aa18.44■□□□□ 0.54
USP39-202ENST00000409025 IRF8Q02556 426 aa18.44■□□□□ 0.54
USP39-202ENST00000409025 FOXM1Q08050 763 aa18.44■□□□□ 0.54
USP39-202ENST00000409025 TRIM25Q14258 630 aaKnown RBP18.44■□□□□ 0.54
USP39-202ENST00000409025 PLA2G4EQ3MJ16 856 aa18.44■□□□□ 0.54
USP39-202ENST00000409025 CACHD1Q5VU97 1274 aa18.44■□□□□ 0.54
USP39-202ENST00000409025 LIPJQ5W064 366 aa18.44■□□□□ 0.54
USP39-202ENST00000409025 DOK6Q6PKX4 331 aa18.44■□□□□ 0.54
USP39-202ENST00000409025 VPS33AQ96AX1 596 aa18.44■□□□□ 0.54
USP39-202ENST00000409025 LRRC58Q96CX6 371 aa18.44■□□□□ 0.54
USP39-202ENST00000409025 GABRG3Q99928 467 aa18.44■□□□□ 0.54
USP39-202ENST00000409025 SLC39A3Q9BRY0 314 aa18.44■□□□□ 0.54
USP39-202ENST00000409025 DPEP2Q9H4A9 486 aa18.44■□□□□ 0.54
USP39-202ENST00000409025 INTS7Q9NVH2 962 aaKnown RBP18.44■□□□□ 0.54
USP39-202ENST00000409025 CD300AQ9UGN4 299 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms