RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 G3V2T6 193 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 CXCR6O00574 342 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 RAD51BO15315 384 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 SGTAO43765 313 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 SCN2BO60939 215 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 EBLN1P0CF75 366 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 GSTM2P28161 218 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 HTR1BP28222 390 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 RHOAP61586 193 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 SREBF2Q12772 1141 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 KCNAB2Q13303 367 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 SPCS2Q15005 226 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 CTF1Q16619 201 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 NEK5Q6P3R8 708 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 CERS6Q6ZMG9 384 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 TPGS1Q6ZTW0 290 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 FRA10AC1Q70Z53 315 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 BTLAQ7Z6A9 289 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 CYP4Z1Q86W10 505 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 DCAF4L2Q8NA75 395 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 MUL1Q969V5 352 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 PPP3R2Q96LZ3 170 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 GLT1D1Q96MS3 346 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 RHNO1Q9BSD3 238 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 ALOXE3Q9BYJ1 711 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 GPN2Q9H9Y4 310 aaPredicted RBP9.61□□□□□ -0.87
MSH2-202ENST00000406134 ZFYVE1Q9HBF4 777 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 EXD2Q9NVH0 621 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 DNAJB9Q9UBS3 223 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 GNPTGQ9UJJ9 305 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 TDRKHQ9Y2W6 561 aaKnown RBP9.61□□□□□ -0.87
MSH2-202ENST00000406134 PKP3Q9Y446 797 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 MUC22E2RYF6 1773 aaPredicted RBP9.61□□□□□ -0.87
MSH2-202ENST00000406134 C1orf232A0A0U1RR37 186 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 NPIPB8E9PQR5 432 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 K7EPI3 171 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 RETP07949 1114 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 CD22P20273 847 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 CTSOP43234 321 aaPredicted RBP9.61□□□□□ -0.87
MSH2-202ENST00000406134 SLC6A12P48065 614 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 BMXP51813 675 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 TMBIM6P55061 237 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 WNT3P56703 355 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 PTSQ03393 145 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 CEP68Q76N32 757 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 STK32CQ86UX6 486 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 CCDC71Q8IV32 467 aaPredicted RBP9.61□□□□□ -0.87
MSH2-202ENST00000406134 PNPT1Q8TCS8 783 aaKnown RBP9.61□□□□□ -0.87
MSH2-202ENST00000406134 HDAC2Q92769 488 aaKnown RBP9.61□□□□□ -0.87
MSH2-202ENST00000406134 ECHDC3Q96DC8 303 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 C11orf24Q96F05 449 aaPredicted RBP9.61□□□□□ -0.87
MSH2-202ENST00000406134 EGLN2Q96KS0 407 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 LYSMD1Q96S90 227 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 GPR63Q9BZJ6 419 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 ASB8Q9H765 288 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 PLGRKTQ9HBL7 147 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 KLQ9UEF7 1012 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 AFF4Q9UHB7 1163 aaKnown RBP9.61□□□□□ -0.87
MSH2-202ENST00000406134 PDE10AQ9Y233 779 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 ZNF510Q9Y2H8 683 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 WDR47O94967 919 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 IL1RNP18510 177 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 NFKBIAP25963 317 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 FAM98BQ52LJ0 330 aaKnown RBP9.61□□□□□ -0.87
MSH2-202ENST00000406134 C6orf141Q5SZD1 244 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 CRTC1Q6UUV9 634 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.61□□□□□ -0.871e-6■■■■■ 33.4
MSH2-202ENST00000406134 ZBTB46Q86UZ6 589 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 MICU2Q8IYU8 434 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 RBFAQ8N0V3 343 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 NXPE1Q8N323 547 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 SMYD1Q8NB12 490 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 RDH12Q96NR8 316 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 TSEN34Q9BSV6 310 aaKnown RBP9.61□□□□□ -0.87
MSH2-202ENST00000406134 TBCDQ9BTW9 1192 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 FAM126AQ9BYI3 521 aaPredicted RBP9.61□□□□□ -0.87
MSH2-202ENST00000406134 CHST8Q9H2A9 424 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 LRTM1Q9HBL6 345 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 RHBDL2Q9NX52 303 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 TMEM9Q9P0T7 183 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 AASSQ9UDR5 926 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 ABCG2Q9UNQ0 655 aa9.61□□□□□ -0.87
MSH2-202ENST00000406134 ELOVL7A1L3X0 281 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 A8MX80 341 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 MITFO75030 526 aaPredicted RBP9.6□□□□□ -0.87
MSH2-202ENST00000406134 DEAF1O75398 565 aaPredicted RBP9.6□□□□□ -0.87
MSH2-202ENST00000406134 CREG1O75629 220 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 ALBP02768 609 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 SDC1P18827 310 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 HOXA9P31269 272 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 CD70P32970 193 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 C16orf72Q14CZ0 275 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 RBM48Q5RL73 367 aaKnown RBP9.6□□□□□ -0.87
MSH2-202ENST00000406134 ARMC12Q5T9G4 340 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 THAP5Q7Z6K1 395 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 ZNF461Q8TAF7 563 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 BHMTQ93088 406 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 MTFMTQ96DP5 389 aaKnown RBP9.6□□□□□ -0.87
MSH2-202ENST00000406134 APIPQ96GX9 242 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 APOL5Q9BWW9 433 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms