RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 XKR8Q9H6D3 395 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 ADPRHL2Q9NX46 363 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 PRKAG3Q9UGI9 489 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 FBXW2Q9UKT8 454 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 I6L893 689 aaPredicted RBP8.89□□□□□ -0.99
LIG4-202ENST00000405925 STATHP02808 62 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 TIMP2P16035 220 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 ATP6V1C1P21283 382 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 HSD17B2P37059 387 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 RPS14P62263 151 aaKnown RBP8.89□□□□□ -0.99
LIG4-202ENST00000405925 MINDY4Q4G0A6 757 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 PIGWQ7Z7B1 504 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 ULK2Q8IYT8 1036 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 TEX26Q8N6G2 289 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 OR9A1PQ8NGU1 263 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 OLIG1Q8TAK6 271 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 SLC22A18Q96BI1 424 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 MYEOVQ96EZ4 313 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 HHIPQ96QV1 700 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 EPB41L4BQ9H329 900 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 IMPAD1Q9NX62 359 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 IL37Q9NZH6 218 aa8.89□□□□□ -0.99
LIG4-202ENST00000405925 A0A0J9YVX5 310 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 LRRC14BA6NHZ5 514 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 TRIM38O00635 465 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 LINC01565O15544 149 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 LAMTOR5O43504 91 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 VEGFDO43915 354 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 SBF1O95248 1867 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 IGLV3-27P01718 113 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 ENO2P09104 434 aaPredicted RBP8.88□□□□□ -0.99
LIG4-202ENST00000405925 GSTM1P09488 218 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 NR2F1P10589 423 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 FCGR1AP12314 374 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 FDXRP22570 491 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 DNAJB1P25685 340 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 ARCN1P48444 511 aaKnown RBP8.88□□□□□ -0.99
LIG4-202ENST00000405925 CCR8P51685 355 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 RALGDSQ12967 914 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 FAM174BQ3ZCQ3 159 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 WDR45BQ5MNZ6 344 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 WLSQ5T9L3 541 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 INTS11Q5TA45 600 aaKnown RBP8.88□□□□□ -0.99
LIG4-202ENST00000405925 ANXA8L1Q5VT79 327 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 KCTD11Q693B1 232 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 PPP4R4Q6NUP7 873 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 LILRA6Q6PI73 481 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 BHLHB9Q6PI77 547 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 CYP4Z1Q86W10 505 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 RALGPS2Q86X27 583 aaPredicted RBP8.88□□□□□ -0.99
LIG4-202ENST00000405925 KRT73Q86Y46 540 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 P3H2Q8IVL5 708 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 ANKRD49Q8WVL7 239 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 NSUN5Q96P11 429 aaKnown RBP8.88□□□□□ -0.99
LIG4-202ENST00000405925 MYADMQ96S97 322 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 FAM83CQ9BQN1 747 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 ACSL5Q9ULC5 683 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 RIMKLBQ9ULI2 386 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 VPS4AQ9UN37 437 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 RUVBL1Q9Y265 456 aaKnown RBP8.88□□□□□ -0.99
LIG4-202ENST00000405925 PSME4Q14997 1843 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 TTC3P53804 2025 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 TTC36A6NLP5 189 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 KLF11O14901 512 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 ATP6V1G2O95670 118 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 FGF3P11487 239 aaPredicted RBP8.88□□□□□ -0.99
LIG4-202ENST00000405925 PRPS2P11908 318 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 GGT5P36269 586 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 CCR4P51679 360 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 ZNF140P52738 457 aaPredicted RBP8.88□□□□□ -0.99
LIG4-202ENST00000405925 CSTF3Q12996 717 aaKnown RBP8.88□□□□□ -0.99
LIG4-202ENST00000405925 NFE2L1Q14494 772 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 STK32CQ86UX6 486 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 PRSS58Q8IYP2 241 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 NRSN1Q8IZ57 195 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 ZNF276Q8N554 614 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 CLPTM1LQ96KA5 538 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 AKTIPQ9H8T0 292 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 FBRSQ9HAH7 460 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 CD248Q9HCU0 757 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 TREX1Q9NSU2 369 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 AP3M1Q9Y2T2 418 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 OR10H1Q9Y4A9 318 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 CTHP32929 405 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 ZNF678Q5SXM1 525 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 C16orf62Q7Z3J2 963 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 CBARPQ8N350 705 aaPredicted RBP8.88□□□□□ -0.99
LIG4-202ENST00000405925 PIGKQ92643 395 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 PROX1Q92786 737 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 TSACCQ96A04 125 aaPredicted RBP8.88□□□□□ -0.99
LIG4-202ENST00000405925 IL17FQ96PD4 163 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 RTKNQ9BST9 563 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 UGT2B28Q9BY64 529 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 FANCEQ9HB96 536 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 EQTNQ9NQ60 294 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 GIMAP2Q9UG22 337 aa8.88□□□□□ -0.99
LIG4-202ENST00000405925 DICER1Q9UPY3 1922 aaKnown RBP8.87□□□□□ -0.99
LIG4-202ENST00000405925 SOBPA7XYQ1 873 aa8.87□□□□□ -0.99
LIG4-202ENST00000405925 STX16-NPEPL1H3BU86 382 aa8.87□□□□□ -0.99
LIG4-202ENST00000405925 STX16O14662 325 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms