RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 LRRC14BA6NHZ5 514 aa15.88■□□□□ 0.13
COL4A3BP-204ENST00000405807 DARSP14868 501 aaKnown RBP15.88■□□□□ 0.13
COL4A3BP-204ENST00000405807 CD53P19397 219 aa15.88■□□□□ 0.13
COL4A3BP-204ENST00000405807 GALEQ14376 348 aa15.88■□□□□ 0.13
COL4A3BP-204ENST00000405807 SEMA3AQ14563 771 aa15.88■□□□□ 0.13
COL4A3BP-204ENST00000405807 PYCR3Q53H96 274 aa15.88■□□□□ 0.13
COL4A3BP-204ENST00000405807 STK32CQ86UX6 486 aa15.88■□□□□ 0.13
COL4A3BP-204ENST00000405807 PHC2Q8IXK0 858 aa15.88■□□□□ 0.13
COL4A3BP-204ENST00000405807 ZNF366Q8N895 744 aa15.88■□□□□ 0.13
COL4A3BP-204ENST00000405807 PSMA8Q8TAA3 256 aa15.88■□□□□ 0.13
COL4A3BP-204ENST00000405807 TMBIM1Q969X1 311 aa15.88■□□□□ 0.13
COL4A3BP-204ENST00000405807 MYBPHLA2RUH7 354 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 SH3D21A4FU49 640 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 CPNE3O75131 537 aaKnown RBP15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 PRSS23O95084 383 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 GOT2P00505 430 aaKnown RBP15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 HPRP00739 348 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 NTRK1P04629 796 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 HOXB8P17481 243 aaPredicted RBP15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 FDXRP22570 491 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 SEPHS1P49903 392 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 POLR2JP52435 117 aaKnown RBP15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 CYP4F2P78329 520 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 CYP4F3Q08477 520 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 LCP2Q13094 533 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 FAM98BQ52LJ0 330 aaKnown RBP15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 ZNF544Q6NX49 715 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 USP50Q70EL3 339 aaPredicted RBP15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 LACC1Q8IV20 430 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 FKBP10Q96AY3 582 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 TEX37Q96LM6 180 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 OR51B5Q9H339 312 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 SLCO3A1Q9UIG8 710 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 PDE10AQ9Y233 779 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 PTCH2Q9Y6C5 1203 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 A0A0G2JLL6 359 aaPredicted RBP15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 HHLA1C9JL84 531 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 UPK1AO00322 258 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 RAP2AP10114 183 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 MTHFD2P13995 350 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 LHX1P48742 406 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 GABARAPL2P60520 117 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 EPS8Q12929 822 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 OR4D1Q15615 310 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 C6orf141Q5SZD1 244 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 LINC00299Q6ZSB3 139 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 PRRT2Q7Z6L0 340 aaPredicted RBP15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 ZBTB44Q8NCP5 570 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 SLC22A17Q8WUG5 538 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 MSANTD3Q96H12 275 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 PIF1Q9H611 641 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 ATP13A1Q9HD20 1204 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 TMEM30AQ9NV96 361 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 BAG5Q9UL15 447 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 PCDHB3Q9Y5E6 796 aa15.87■□□□□ 0.13
COL4A3BP-204ENST00000405807 RRN3P2A6NIE6 340 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 NFKBIEO00221 500 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 TBC1D4O60343 1298 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 ZDHHC13Q8IUH4 622 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 LGI2Q8N0V4 545 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 ZNF555Q8NEP9 628 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 ZNF578Q96N58 590 aaPredicted RBP15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 TINAGL1Q9GZM7 467 aaPredicted RBP15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 TFB2MQ9H5Q4 396 aaKnown RBP15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 SLAMF8Q9P0V8 285 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 KIF17Q9P2E2 1029 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 GMPPBQ9Y5P6 360 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 SNX5Q9Y5X3 404 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 A0A1W2PRG6 482 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 MROH6A6NGR9 719 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 I3L521 148 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 PRKD3O94806 890 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 ECDO95905 644 aaPredicted RBP15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 C1RP00736 705 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 PRR35P0CG20 571 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 ZNF250P15622 560 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 MAGP20916 626 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 CD40LGP29965 261 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 ZFP36L2P47974 494 aaKnown RBP15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 OR4D2P58180 307 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 UFM1P61960 85 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 RPP38P78345 283 aaKnown RBP15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 POLD3Q15054 466 aaPredicted RBP15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 EFL1Q7Z2Z2 1120 aaKnown RBP15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 MRPL10Q7Z7H8 261 aaKnown RBP15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 SH3RF2Q8TEC5 729 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 FOXJ1Q92949 421 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 PABPC5Q96DU9 382 aaKnown RBP15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 SMARCD1Q96GM5 515 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 SENP8Q96LD8 212 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 GDF15Q99988 308 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 BRINP2Q9C0B6 783 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 MARCH4Q9P2E8 410 aaPredicted RBP15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 USP22Q9UPT9 525 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 IPPQ9Y573 584 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 PLD2O14939 933 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 ZNF780AO75290 641 aaPredicted RBP15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 PROS1P07225 676 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 IL7RP16871 459 aa15.86■□□□□ 0.13
COL4A3BP-204ENST00000405807 ARSDP51689 593 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms