RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 SYF2O95926 243 aaKnown RBP16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 CHRM5P08912 532 aaPredicted RBP16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 MAP4P27816 1152 aaKnown RBP16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 GCAP28676 217 aa16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 RAB28P51157 221 aa16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 KPNA2P52292 529 aaKnown RBP16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 SHC2P98077 582 aa16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 ZKSCAN8Q15776 578 aaPredicted RBP16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 FBXO38Q6PIJ6 1188 aa16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 LINC01555Q8NAE3 123 aa16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 OR9A1PQ8NGU1 263 aa16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 DENND1AQ8TEH3 1009 aa16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 GRAMD1AQ96CP6 724 aa16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 PPM1MQ96MI6 270 aa16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 UNKQ9C0B0 810 aaKnown RBP16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 ACTR10Q9NZ32 417 aa16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 OR6C2Q9NZP2 312 aa16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 ANGPTL2Q9UKU9 493 aa16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 RAB21Q9UL25 225 aa16.65■□□□□ 0.26
PTCHD3P3-201ENST00000403073 CNOT1A5YKK6 2376 aaKnown RBP16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 PIPSLA2A3N6 862 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 TRABD2BA6NFA1 517 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 C2orf74A8MZ97 194 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 MYO1CO00159 1063 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CDC7O00311 574 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SLC16A5O15375 505 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 RASSF9O75901 435 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SHBGP04278 402 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 C8GP07360 202 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CCDC166P0CW27 439 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 HGFP14210 728 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 PRDX3P30048 256 aaKnown RBP16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SERPINB9P50453 376 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 TRA2AQ13595 282 aaKnown RBP eCLIP16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 C3orf38Q5JPI3 329 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CACHD1Q5VU97 1274 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 FOXR1Q6PIV2 292 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 RAPH1Q70E73 1250 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ARHGAP22Q7Z5H3 698 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 TAX1BP1Q86VP1 789 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 FBXO15Q8NCQ5 510 aaPredicted RBP16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 OR2L8Q8NGY9 312 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 LIN37Q96GY3 246 aaPredicted RBP16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 MAP3K3Q99759 626 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 DHRS4Q9BTZ2 278 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SLC12A9Q9BXP2 914 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 PARVBQ9HBI1 364 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SATB2Q9UPW6 733 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 PDE10AQ9Y233 779 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SPEGQ15772 3267 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ASXL3Q9C0F0 2248 aa16.64■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CCDC187A0A096LP49 1063 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ISM1B1AKI9 464 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 MPOP05164 745 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SLC35E2BP0CK96 405 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CRABP2P29373 138 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 PEBP1P30086 187 aaKnown RBP16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 HSD17B3P37058 310 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SEPHS1P49903 392 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SP140Q13342 867 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 FASTKQ14296 549 aaKnown RBP16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 PHKG1Q16816 387 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 EMBQ6PCB8 327 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 RAB11FIP2Q7L804 512 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 FBXO39Q8N4B4 442 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 RAB42Q8N4Z0 105 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 WDR36Q8NI36 951 aaKnown RBP16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 MCOLN3Q8TDD5 553 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 OR2A14Q96R47 310 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CCDC77Q9BR77 488 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 TWSG1Q9GZX9 223 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SNX15Q9NRS6 342 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SPATA7Q9P0W8 599 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 LNPEPQ9UIQ6 1025 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ZNF180Q9UJW8 692 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 POMT2Q9UKY4 750 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 LOXL2Q9Y4K0 774 aa16.63■□□□□ 0.25
PTCHD3P3-201ENST00000403073 IGHV5-51A0A0C4DH38 117 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 NPEPPSL1A6NEC2 478 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 MATN2O00339 956 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 HGSO14964 777 aaPredicted RBP16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 TOX3O15405 576 aaPredicted RBP16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 KRT38O76015 456 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 SLC16A8O95907 504 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ALDOAP04075 364 aaKnown RBP16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 C2P06681 752 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CCL4P13236 92 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 UGT2B7P16662 529 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CYP2A7P20853 494 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CSTF2P33240 577 aaKnown RBP eCLIP16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 LSSP48449 732 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CSHL1Q14406 222 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 CYP2A13Q16696 494 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ANKS6Q68DC2 871 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 ADGRD1Q6QNK2 874 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 PRSS42Q7Z5A4 293 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 TRIM73Q86UV7 250 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 FAM20CQ8IXL6 584 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 PPFIBP2Q8ND30 876 aa16.62■□□□□ 0.25
PTCHD3P3-201ENST00000403073 FLVCR1-AS1Q8TAF5 88 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms