RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 ALDH3A2P51648 485 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 TPTEP56180 551 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 FBXO43Q4G163 708 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 OR2T5Q6IEZ7 315 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 FBXL22Q6P050 247 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 NATD1Q8N6N6 113 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 C2CD4AQ8NCU7 369 aaPredicted RBP16.38■□□□□ 0.21
TSC2-204ENST00000401874 OR2T29Q8NH02 315 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 ZNF354BQ96LW1 612 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 PAK6Q9NQU5 681 aaPredicted RBP16.38■□□□□ 0.21
TSC2-204ENST00000401874 TMED5Q9Y3A6 229 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 AGRPO00253 132 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 CDH15P55291 814 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 CRTC2Q53ET0 693 aaPredicted RBP16.38■□□□□ 0.21
TSC2-204ENST00000401874 RBM20Q5T481 1227 aaKnown RBP16.38■□□□□ 0.21
TSC2-204ENST00000401874 CAND1Q86VP6 1230 aaKnown RBP16.38■□□□□ 0.21
TSC2-204ENST00000401874 ARL14EPQ8N8R7 260 aaPredicted RBP16.38■□□□□ 0.21
TSC2-204ENST00000401874 SLC22A17Q8WUG5 538 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 DPF3Q92784 378 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 PRICKLE1Q96MT3 831 aaPredicted RBP16.38■□□□□ 0.21
TSC2-204ENST00000401874 SLC32A1Q9H598 525 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 PFDN2Q9UHV9 154 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 POFUT2Q9Y2G5 429 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 PPEF2O14830 753 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 PAPSS2O95340 614 aaPredicted RBP16.38■□□□□ 0.21
TSC2-204ENST00000401874 PIK3CBP42338 1070 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 ZNF155Q12901 538 aaPredicted RBP16.38■□□□□ 0.21
TSC2-204ENST00000401874 HFE2Q6ZVN8 426 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 SMG8Q8ND04 991 aaKnown RBP16.38■□□□□ 0.21
TSC2-204ENST00000401874 VPS29Q9UBQ0 182 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 CLIC1O00299 241 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 CBSLP0DN79 551 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 CBSP35520 551 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 PSMD8P48556 350 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 RNASE12Q5GAN4 147 aaKnown RBP16.38■□□□□ 0.21
TSC2-204ENST00000401874 ACDQ96AP0 544 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 SUSD3Q96L08 255 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 MIPEPQ99797 713 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 TVP23BQ9NYZ1 205 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 FLRT1Q9NZU1 646 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 IKZF2Q9UKS7 526 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 CLEC4AQ9UMR7 237 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 HS3ST4Q9Y661 456 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 NALCNQ8IZF0 1738 aa16.38■□□□□ 0.21
TSC2-204ENST00000401874 BHMG1C9JSJ3 638 aaPredicted RBP16.37■□□□□ 0.21
TSC2-204ENST00000401874 PITPNM1O00562 1244 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 REM1O75628 298 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 SNX4O95219 450 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 TUBA3CQ13748 450 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 GALNT13Q8IUC8 556 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 SAMD14Q8IZD0 417 aaPredicted RBP16.37■□□□□ 0.21
TSC2-204ENST00000401874 FBXO22Q8NEZ5 403 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 AURKBQ96GD4 344 aaPredicted RBP16.37■□□□□ 0.21
TSC2-204ENST00000401874 POPDC3Q9HBV1 291 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 TBC1D3DA0A087WVF3 549 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 TBC1D3IA0A087WXS9 549 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 TBC1D3EA0A087X179 549 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 TBC1D3KA0A087X1G2 549 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.37■□□□□ 0.21
TSC2-204ENST00000401874 TBC1D3FA6NER0 549 aaPredicted RBP16.37■□□□□ 0.21
TSC2-204ENST00000401874 TBC1D3LB9A6J9 549 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 CCL16O15467 120 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 TBC1D3HP0C7X1 549 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 NT5EP21589 574 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 ECHS1P30084 290 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 STXBP1P61764 594 aaKnown RBP16.37■□□□□ 0.21
TSC2-204ENST00000401874 TBC1D3GQ6DHY5 549 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 TBC1D3CQ6IPX1 549 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 SLC2A7Q6PXP3 512 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 TBC1D3Q8IZP1 549 aaPredicted RBP16.37■□□□□ 0.21
TSC2-204ENST00000401874 ZNF433Q8N7K0 673 aaPredicted RBP16.37■□□□□ 0.21
TSC2-204ENST00000401874 ART5Q96L15 291 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 WRAP53Q9BUR4 548 aaKnown RBP16.37■□□□□ 0.21
TSC2-204ENST00000401874 ITPAQ9BY32 194 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 POLR2J3Q9H1A7 115 aaKnown RBP16.37■□□□□ 0.21
TSC2-204ENST00000401874 SNTG1Q9NSN8 517 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 LOC100130705A0A1B0GUX0 176 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 A0A1W2PRB8 838 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 APODP05090 189 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 F7P08709 466 aaPredicted RBP16.37■□□□□ 0.21
TSC2-204ENST00000401874 HMGCS1Q01581 520 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 BNIP3Q12983 259 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 MPP2Q14168 576 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 ADNP2Q6IQ32 1131 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 MTERF1Q99551 399 aaKnown RBP16.37■□□□□ 0.21
TSC2-204ENST00000401874 MAP10Q9P2G4 905 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 SIX4Q9UIU6 781 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 HAS3O00219 553 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 ENGP17813 658 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 EFNA1P20827 205 aaPredicted RBP16.37■□□□□ 0.21
TSC2-204ENST00000401874 CSKP41240 450 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 CRISP3P54108 245 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 AP1S2P56377 157 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 TARDBPQ13148 414 aaKnown RBP eCLIP16.37■□□□□ 0.21
TSC2-204ENST00000401874 KIAA1191Q96A73 305 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 BIRC7Q96CA5 298 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 MYOCQ99972 504 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 POLR2J2Q9GZM3 115 aaKnown RBP16.37■□□□□ 0.21
TSC2-204ENST00000401874 ANKHQ9HCJ1 492 aa16.37■□□□□ 0.21
TSC2-204ENST00000401874 RWDD3Q9Y3V2 267 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms