RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 TCRBV5S2A0A599 114 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 TMEM247A6NEH6 219 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 TMEM88BA6NKF7 163 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 K7EPI3 171 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 CLDN9O95484 217 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 NADKO95544 446 aaPredicted RBP12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 PENKP01210 267 aaPredicted RBP12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 PDYNP01213 254 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 HOXC8P31273 242 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 CLK1P49759 484 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 VBP1P61758 197 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 ACVR1Q04771 509 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 RING1Q06587 406 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 NFATC2Q13469 925 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 PON2Q15165 354 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 PTCHD3Q3KNS1 767 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 USP41Q3LFD5 358 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 AHSA2Q719I0 299 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 ZNF554Q86TJ5 538 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 TMEM132CQ8N3T6 1108 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 OR7A2PQ8NGA2 310 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 COPS8Q99627 209 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 RHNO1Q9BSD3 238 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 ASPSCR1Q9BZE9 553 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 MIR1-1HGQ9H1L0 117 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 NTN4Q9HB63 628 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 POPDC3Q9HBV1 291 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 C1orf109Q9NX04 203 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 MARCH5Q9NX47 278 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 DNAJB9Q9UBS3 223 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 C3orf18Q9UK00 162 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 A0A0G2JMZ2 1700 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 LRRC37A2A6NM11 1700 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 LOC100506127A0A0U1RQW1 187 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 LOC100130705A0A1B0GUX0 176 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 MANBAO00462 879 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 BPIP17213 487 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 TNFRSF1BP20333 461 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 IGFBP5P24593 272 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 CLCN7P51798 805 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 EMP3P54852 163 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 MADCAM1Q13477 382 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 C6orf141Q5SZD1 244 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 TMEM236Q5W0B7 351 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 SPRED1Q7Z699 444 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 CD99L2Q8TCZ2 262 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 REXO5Q96IC2 774 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 C2orf49Q9BVC5 232 aaPredicted RBP12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 RBMX2Q9Y388 322 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 TAPBPO15533 448 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 AOC2O75106 756 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 CAPN15O75808 1086 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 CTSOP43234 321 aaPredicted RBP12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 PLA2G16P53816 162 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 FOXM1Q08050 763 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 TRAF3Q13114 568 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 UAP1L1Q3KQV9 507 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 GPR153Q6NV75 609 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 BORAQ6PGQ7 559 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 ZNF773Q6PK81 442 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 PLD3Q8IV08 490 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 KLHDC8BQ8IXV7 354 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 TTC30BQ8N4P2 665 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 GTF2H4Q92759 462 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 BARD1Q99728 777 aaKnown RBP12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 CD244Q9BZW8 370 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 ERVK-18Q9QC07 812 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 COQ6Q9Y2Z9 468 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 GGT1P19440 569 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 TPP2P29144 1249 aaPredicted RBP12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 CDKN2CP42773 168 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 HLCSP50747 726 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 SUOXP51687 545 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 CHIT1Q13231 466 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 XKR7Q5GH72 579 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 C8orf82Q6P1X6 216 aaPredicted RBP12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 SERPINA13PQ6UXR4 307 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 NECAB2Q7Z6G3 386 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 TMEM179BQ7Z7N9 219 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 C10orf111Q8N326 155 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 BORCS5Q969J3 196 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 FUNDC2Q9BWH2 189 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 MTG2Q9H4K7 406 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 SPASTQ9UBP0 616 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 RAPGEFL1Q9UHV5 662 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 CORINQ9Y5Q5 1042 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 TET1Q8NFU7 2136 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 NUDT6P53370 316 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 RAPSNQ13702 412 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 XKR6Q5GH73 641 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 NCEH1Q6PIU2 408 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 RNF168Q8IYW5 571 aaPredicted RBP12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 SH3GL1Q99961 368 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 NINQ8N4C6 2090 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 SLC28A1O00337 649 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 WISP3O95389 354 aaPredicted RBP12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 VNN2O95498 520 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 ALPLP05186 524 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 RECQLP46063 649 aaPredicted RBP12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 SREBF2Q12772 1141 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms