RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 C12orf43Q96C57 262 aaKnown RBP18.13■□□□□ 0.49
USP48-204ENST00000400301 TBC1D14Q9P2M4 693 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.13■□□□□ 0.49
USP48-204ENST00000400301 PCDHGA11Q9Y5H2 935 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 ZNF195O14628 629 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 ALOX12P18054 663 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 HTR1EP28566 365 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 HOXC13P31276 330 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 SLC6A4P31645 630 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 HNF1BP35680 557 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 AHSA2Q719I0 299 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 DEPDC4Q8N2C3 294 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 QRFPRQ96P65 431 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 ATOH8Q96SQ7 321 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 TSEN34Q9BSV6 310 aaKnown RBP18.13■□□□□ 0.49
USP48-204ENST00000400301 YTHDF1Q9BYJ9 559 aaKnown RBP18.13■□□□□ 0.49
USP48-204ENST00000400301 RIMKLBQ9ULI2 386 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 KLHL20Q9Y2M5 609 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 INPPL1O15357 1258 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 CREG1O75629 220 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 PABPC1P11940 636 aaKnown RBP18.13■□□□□ 0.49
USP48-204ENST00000400301 LSAMPQ13449 338 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 PAGE3Q5JUK9 113 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 AMER2Q8N7J2 671 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 TTC29Q8NA56 475 aaPredicted RBP18.13■□□□□ 0.49
USP48-204ENST00000400301 PIK3C3Q8NEB9 887 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 DUSP26Q9BV47 211 aa18.13■□□□□ 0.49
USP48-204ENST00000400301 FBP2O00757 339 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 C8BP07358 591 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.12■□□□□ 0.492e-9■■■■□ 23.5
USP48-204ENST00000400301 ATP6AP1Q15904 470 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 PLEKHG6Q3KR16 790 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 MFSD6LQ8IWD5 586 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 PGBD5Q8N414 524 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 MDGA1Q8NFP4 955 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 RAB2BQ8WUD1 216 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 MUS81Q96NY9 551 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 RETREG1Q9H6L5 497 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 ELAC1Q9H777 363 aaKnown RBP18.12■□□□□ 0.49
USP48-204ENST00000400301 RPF2Q9H7B2 306 aaKnown RBP18.12■□□□□ 0.49
USP48-204ENST00000400301 TEKT2Q9UIF3 430 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 TMEM189-UBE2V1I3L0A0 370 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 MUSKO15146 869 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 CBFA2T3O75081 653 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 ALDOCP09972 364 aaKnown RBP18.12■□□□□ 0.49
USP48-204ENST00000400301 BMP2P12643 396 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 IL7RP16871 459 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 DPY19L1Q2PZI1 675 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 SDE2Q6IQ49 451 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 PDE12Q6L8Q7 609 aaKnown RBP18.12■□□□□ 0.49
USP48-204ENST00000400301 MED27Q6P2C8 311 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 MBOAT1Q6ZNC8 495 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 LILRA2Q8N149 483 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 VPS29Q9UBQ0 182 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 ASB3Q9Y575 518 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 SNTNA6NMZ2 147 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 UBE3AQ05086 875 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 COQ5Q5HYK3 327 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 SPANXN2Q5MJ10 180 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 LRRC70Q7Z2Q7 622 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 CD200R1Q8TD46 325 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 BOCQ9BWV1 1114 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 CAPN10Q9HC96 672 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 AASDHPPTQ9NRN7 309 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 EXD2Q9NVH0 621 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 TESMINQ9Y4I5 508 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 MROH6A6NGR9 719 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 SOD2P04179 222 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 CXCR2P25025 360 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 EIF2B2P49770 351 aaKnown RBP18.12■□□□□ 0.49
USP48-204ENST00000400301 BNIP3Q12983 259 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 GK3PQ14409 553 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 DSC3Q14574 896 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 PLA2G4EQ3MJ16 856 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 ZFAND4Q86XD8 727 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 KRTCAP2Q8N6L1 136 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 MYRFLQ96LU7 910 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 GPR78Q96P69 363 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 NUAK2Q9H093 628 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 TOR3AQ9H497 397 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 MAP4K5Q9Y4K4 846 aa18.12■□□□□ 0.49
USP48-204ENST00000400301 A0A1W2PPW3 197 aa18.11■□□□□ 0.49
USP48-204ENST00000400301 TNFRSF11BO00300 401 aa18.11■□□□□ 0.49
USP48-204ENST00000400301 ALDH4A1P30038 563 aa18.11■□□□□ 0.49
USP48-204ENST00000400301 RFX3P48380 749 aa18.11■□□□□ 0.49
USP48-204ENST00000400301 KCNC1P48547 511 aa18.11■□□□□ 0.49
USP48-204ENST00000400301 HNMTP50135 292 aa18.11■□□□□ 0.49
USP48-204ENST00000400301 AP1S2P56377 157 aa18.11■□□□□ 0.49
USP48-204ENST00000400301 SEMA3AQ14563 771 aa18.11■□□□□ 0.49
USP48-204ENST00000400301 NCF4Q15080 339 aa18.11■□□□□ 0.49
USP48-204ENST00000400301 GPRC6AQ5T6X5 926 aa18.11■□□□□ 0.49
USP48-204ENST00000400301 NCEH1Q6PIU2 408 aa18.11■□□□□ 0.49
USP48-204ENST00000400301 GDPD4Q6W3E5 623 aa18.11■□□□□ 0.49
USP48-204ENST00000400301 PHYKPLQ8IUZ5 450 aa18.11■□□□□ 0.49
USP48-204ENST00000400301 ABCB10Q9NRK6 738 aa18.11■□□□□ 0.49
USP48-204ENST00000400301 HCSTQ9UBK5 93 aa18.11■□□□□ 0.49
USP48-204ENST00000400301 OAS3Q9Y6K5 1087 aaKnown RBP18.11■□□□□ 0.49
USP48-204ENST00000400301 GPR39O43194 453 aa18.11■□□□□ 0.49
USP48-204ENST00000400301 RASAL1O95294 804 aa18.11■□□□□ 0.49
USP48-204ENST00000400301 ENGP17813 658 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms