RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 SMIM11AP58511 58 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 MYBPC1Q00872 1141 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 MXD1Q05195 221 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 SLC13A2Q13183 592 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 TOP3AQ13472 1001 aaPredicted RBP3.2□□□□□ -1.9
KNL1-202ENST00000399668 DPYSQ14117 519 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 TAB1Q15750 504 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 CARTPTQ16568 116 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 PPP1R3AQ16821 1122 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 IRAK1BP1Q5VVH5 260 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 ZNF544Q6NX49 715 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 RNF19BQ6ZMZ0 732 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 FRRS1Q6ZNA5 592 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 IQCHQ86VS3 1027 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 GALNT13Q8IUC8 556 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 CILP2Q8IUL8 1156 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 TXNDC5Q8NBS9 432 aaKnown RBP3.2□□□□□ -1.9
KNL1-202ENST00000399668 OR9I1Q8NGQ6 314 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 SH3RF2Q8TEC5 729 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 WDR60Q8WVS4 1066 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 S100A13Q99584 98 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 SLC38A3Q99624 504 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 CADM1Q9BY67 442 aaKnown RBP3.2□□□□□ -1.9
KNL1-202ENST00000399668 XYLT2Q9H1B5 865 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 OR51V1Q9H2C8 321 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 TMLHEQ9NVH6 421 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 SUCOQ9UBS9 1254 aaKnown RBP3.2□□□□□ -1.9
KNL1-202ENST00000399668 ZNF222Q9UK12 451 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 MALRD1Q5VYJ5 2156 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 LRRC72A6NJI9 287 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 BBIP1A8MTZ0 92 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 DIRAS1O95057 198 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 C4BPBP20851 252 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 NUP62P37198 522 aaPredicted RBP3.2□□□□□ -1.9
KNL1-202ENST00000399668 HNMTP50135 292 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 ROR2Q01974 943 aaKnown RBP3.2□□□□□ -1.9
KNL1-202ENST00000399668 RHAGQ02094 409 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 ENPEPQ07075 957 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 PIK3R6Q5UE93 754 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 METTL21CQ5VZV1 264 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 SMYD5Q6GMV2 418 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 FBXL22Q6P050 247 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 MSANTD2Q6P1R3 559 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 TNFAIP8L2Q6P589 184 aaPredicted RBP3.2□□□□□ -1.9
KNL1-202ENST00000399668 RTL4Q6ZR62 310 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 ADGRG2Q8IZP9 1017 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 FAM46DQ8NEK8 389 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 MOSPD2Q8NHP6 518 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 CAPSLQ8WWF8 208 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 PMEPA1Q969W9 287 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 C12orf66Q96MD2 445 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 C7orf26Q96N11 449 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 FCRL4Q96PJ5 515 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 KCNC2Q96PR1 638 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 PHF12Q96QT6 1004 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 TMEM209Q96SK2 561 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 ABCG4Q9H172 646 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 CLEC4MQ9H2X3 399 aaPredicted RBP3.2□□□□□ -1.9
KNL1-202ENST00000399668 SUV39H2Q9H5I1 410 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 CCDC177Q9NQR7 707 aaPredicted RBP3.2□□□□□ -1.9
KNL1-202ENST00000399668 EIF2B3Q9NR50 452 aaKnown RBP3.2□□□□□ -1.9
KNL1-202ENST00000399668 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.2□□□□□ -1.9
KNL1-202ENST00000399668 PHPT1Q9NRX4 125 aaPredicted RBP3.2□□□□□ -1.9
KNL1-202ENST00000399668 EXD2Q9NVH0 621 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 IGSF9Q9P2J2 1179 aa3.2□□□□□ -1.9
KNL1-202ENST00000399668 COL24A1Q17RW2 1714 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 SRRM3A6NNA2 597 aaPredicted RBP3.19□□□□□ -1.9
KNL1-202ENST00000399668 H3BNH8 94 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 ARVCFO00192 962 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 CASKO14936 926 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 NFATC1O95644 943 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 C8GP07360 202 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 LAMP2P13473 410 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 PTPN2P17706 415 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 LAG3P18627 525 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 DDX6P26196 483 aaKnown RBP eCLIP3.19□□□□□ -1.9
KNL1-202ENST00000399668 TTKP33981 857 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 GMPRP36959 345 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 ARCN1P48444 511 aaKnown RBP3.19□□□□□ -1.9
KNL1-202ENST00000399668 NAA20P61599 178 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 PCDH1Q08174 1060 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 IL18Q14116 193 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 LACTB2Q53H82 288 aaPredicted RBP3.19□□□□□ -1.9
KNL1-202ENST00000399668 CDCA2Q69YH5 1023 aaPredicted RBP3.19□□□□□ -1.9
KNL1-202ENST00000399668 TAS1R3Q7RTX0 852 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 SNX20Q7Z614 316 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 C14orf80Q86SX3 495 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 SLCO6A1Q86UG4 719 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 ZNF280BQ86YH2 543 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 UBE2J2Q8N2K1 259 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 PHTF2Q8N3S3 785 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 ARL10Q8N8L6 244 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 C11orf65Q8NCR3 313 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 OR4C6Q8NH72 309 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 MCFD2Q8NI22 146 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 RNASE11Q8TAA1 199 aaKnown RBP3.19□□□□□ -1.9
KNL1-202ENST00000399668 SLC35B2Q8TB61 432 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 OXCT2Q9BYC2 517 aaPredicted RBP3.19□□□□□ -1.9
KNL1-202ENST00000399668 HAPLN2Q9GZV7 340 aa3.19□□□□□ -1.9
KNL1-202ENST00000399668 LMAN2LQ9H0V9 348 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms