RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 CYP2A13Q16696 494 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 LGSNQ5TDP6 509 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 ANKS6Q68DC2 871 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 B3GNT8Q7Z7M8 397 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 ADGRF3Q8IZF5 1079 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 WDR36Q8NI36 951 aaKnown RBP17.13■□□□□ 0.33
CTNS-203ENST00000399306 MCOLN3Q8TDD5 553 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 AENQ8WTP8 325 aaKnown RBP17.13■□□□□ 0.33
CTNS-203ENST00000399306 CAVIN3Q969G5 261 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 ISL2Q96A47 359 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 LINGO1Q96FE5 620 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 PAFAH2Q99487 392 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 CMKLR1Q99788 373 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 DERL2Q9GZP9 239 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 EPB41L4BQ9H329 900 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 SEMA6CQ9H3T2 930 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 PARVBQ9HBI1 364 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 KLK13Q9UKR3 277 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 POMT2Q9UKY4 750 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 TDRKHQ9Y2W6 561 aaKnown RBP17.13■□□□□ 0.33
CTNS-203ENST00000399306 PCM1Q15154 2024 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 KIF26BQ2KJY2 2108 aa17.12■□□□□ 0.33
CTNS-203ENST00000399306 EXOC1LA0A1B0GW35 172 aa17.12■□□□□ 0.33
CTNS-203ENST00000399306 PIPSLA2A3N6 862 aa17.12■□□□□ 0.33
CTNS-203ENST00000399306 CASC3O15234 703 aaKnown RBP17.12■□□□□ 0.33
CTNS-203ENST00000399306 LSSP48449 732 aa17.12■□□□□ 0.33
CTNS-203ENST00000399306 AP1S2P56377 157 aa17.12■□□□□ 0.33
CTNS-203ENST00000399306 RASA2Q15283 850 aa17.12■□□□□ 0.33
CTNS-203ENST00000399306 UBAP2Q5T6F2 1119 aaKnown RBP17.12■□□□□ 0.33
CTNS-203ENST00000399306 TMEM207Q6UWW9 146 aa17.12■□□□□ 0.33
CTNS-203ENST00000399306 UBE2R2Q712K3 238 aaPredicted RBP17.12■□□□□ 0.33
CTNS-203ENST00000399306 PIWIL4Q7Z3Z4 852 aaKnown RBP17.12■□□□□ 0.33
CTNS-203ENST00000399306 CEP97Q8IW35 865 aa17.12■□□□□ 0.33
CTNS-203ENST00000399306 GSPT2Q8IYD1 628 aaKnown RBP17.12■□□□□ 0.33
CTNS-203ENST00000399306 LSMEM2Q8N112 164 aa17.12■□□□□ 0.33
CTNS-203ENST00000399306 AGBL5Q8NDL9 886 aa17.12■□□□□ 0.33
CTNS-203ENST00000399306 KLHL6Q8WZ60 621 aa17.12■□□□□ 0.33
CTNS-203ENST00000399306 UBXN10Q96LJ8 280 aa17.12■□□□□ 0.33
CTNS-203ENST00000399306 CCDC74BQ96LY2 380 aa17.12■□□□□ 0.33
CTNS-203ENST00000399306 PITPNM3Q9BZ71 974 aa17.12■□□□□ 0.33
CTNS-203ENST00000399306 CHRNA10Q9GZZ6 450 aa17.12■□□□□ 0.33
CTNS-203ENST00000399306 ZMYND15Q9H091 742 aa17.12■□□□□ 0.33
CTNS-203ENST00000399306 ZNF768Q9H5H4 540 aaKnown RBP17.12■□□□□ 0.33
CTNS-203ENST00000399306 C1GALT1Q9NS00 363 aa17.12■□□□□ 0.33
CTNS-203ENST00000399306 HMX2A2RU54 273 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 BTN3A3O00478 584 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 BTN3A1O00481 513 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 FAM155BO75949 473 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 DXOO77932 396 aaKnown RBP17.11■□□□□ 0.33
CTNS-203ENST00000399306 TOP3BO95985 862 aaKnown RBP17.11■□□□□ 0.33
CTNS-203ENST00000399306 CHRM5P08912 532 aaPredicted RBP17.11■□□□□ 0.33
CTNS-203ENST00000399306 PPM1FP49593 454 aaPredicted RBP17.11■□□□□ 0.33
CTNS-203ENST00000399306 SERPINB8P50452 374 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 ATP6V0D1P61421 351 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 SLC5A12Q1EHB4 618 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.11■□□□□ 0.33
CTNS-203ENST00000399306 PHF19Q5T6S3 580 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 CYB5D1Q6P9G0 228 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 ADGRD1Q6QNK2 874 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 ADAMTSL2Q86TH1 951 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 DCAKDQ8WVC6 231 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 NXPE2Q96DL1 559 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 MTBPQ96DY7 904 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 CCDC138Q96M89 665 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 TGM7Q96PF1 710 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 PARD6BQ9BYG5 372 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 TRIM54Q9BYV2 358 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 POLR1BQ9H9Y6 1135 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 ACTR10Q9NZ32 417 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 TMEM9Q9P0T7 183 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 DKK4Q9UBT3 224 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 ANKRD12Q6UB98 2062 aa17.11■□□□□ 0.33
CTNS-203ENST00000399306 A0A087X1B8 175 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 B4E171 279 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 KRT37O76014 449 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 HIST1H2AGP0C0S8 130 aaPredicted RBP17.1■□□□□ 0.33
CTNS-203ENST00000399306 POLR2CP19387 275 aaPredicted RBP17.1■□□□□ 0.33
CTNS-203ENST00000399306 HIST1H2ADP20671 130 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 SAT1P21673 171 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 PRDX3P30048 256 aaKnown RBP17.1■□□□□ 0.33
CTNS-203ENST00000399306 CSTF2P33240 577 aaKnown RBP eCLIP17.1■□□□□ 0.33
CTNS-203ENST00000399306 TSPAN7P41732 249 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 BDKRB1P46663 353 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 GFERP55789 205 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 CLDN6P56747 220 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 CDKL1Q00532 357 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 NAA25Q14CX7 972 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 CDKL4Q5MAI5 379 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 MROH9Q5TGP6 573 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 IRGCQ6NXR0 463 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 RAB11FIP2Q7L804 512 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 TDRPQ86YL5 185 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 MREGQ8N565 214 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 DENND1AQ8TEH3 1009 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 SLC41A2Q96JW4 573 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 HIST1H2AHQ96KK5 128 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 HIST1H2AJQ99878 128 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 H2AFJQ9BTM1 129 aa17.1■□□□□ 0.33
CTNS-203ENST00000399306 RUVBL2Q9Y230 463 aaKnown RBP17.1■□□□□ 0.33
CTNS-203ENST00000399306 FAM149AA5PLN7 773 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms