RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 SEMA6AQ9H2E6 1030 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 UBAP1Q9NZ09 502 aa17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 TSR3Q9UJK0 312 aaKnown RBP17.29■□□□□ 0.36
HLA-DQB1-204ENST00000399084 KCNE1BA0A087WTH5 132 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 C7orf72A4D263 438 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 FFAR3O14843 346 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 GPR42O15529 346 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 AHCYL1O43865 530 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ATG13O75143 517 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 PSIP1O75475 530 aaKnown RBP17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 HSD3B1P14060 373 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 EPORP19235 508 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 HSD3B2P26439 372 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 PLOD1Q02809 727 aaPredicted RBP17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CSTF3Q12996 717 aaKnown RBP17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 PTCHD3Q3KNS1 767 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 NHSL2Q5HYW2 709 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ATG9BQ674R7 924 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 GLYATQ6IB77 296 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 Q6ZVL8 140 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 NLRP8Q86W28 1048 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CARM1Q86X55 608 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 LIX1Q8N485 282 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 FBXO15Q8NCQ5 510 aaPredicted RBP17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 SKA2Q8WVK7 121 aaPredicted RBP17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 STARD8Q92502 1023 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ELMO1Q92556 727 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CNBD2Q96M20 576 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CIB1Q99828 191 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 UGT2B28Q9BY64 529 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 KCNH6Q9H252 994 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 PNPLA3Q9NST1 481 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 INTS7Q9NVH2 962 aaKnown RBP17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 MAN2B2Q9Y2E5 1009 aa17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 MRPS23Q9Y3D9 190 aaKnown RBP17.28■□□□□ 0.36
HLA-DQB1-204ENST00000399084 C16orf96A6NNT2 1141 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 TTC34A8MYJ7 566 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 RASAL1O95294 804 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 LDLRP01130 860 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ANXA6P08133 673 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ADH5P11766 374 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 BCKDHAP12694 445 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 JUPP14923 745 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 IL1RNP18510 177 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 MMP12P39900 470 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 PNLIPRP1P54315 467 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 RPS14P62263 151 aaKnown RBP17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ELP6Q0PNE2 266 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 EIF4HQ15056 248 aaKnown RBP17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 C6orf52Q5T4I8 152 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 RFLNAQ6ZTI6 216 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 IFNEQ86WN2 208 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 TMIEQ8NEW7 156 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 TFAP2CQ92754 450 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 GLYATL1Q969I3 302 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 TMEM159Q96B96 161 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 BIRC7Q96CA5 298 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 SAMD11Q96NU1 681 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 CCM2Q9BSQ5 444 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 ZCCHC2Q9C0B9 1178 aaKnown RBP17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 YIPF3Q9GZM5 350 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 DUS2Q9NX74 493 aaKnown RBP17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 WNT6Q9Y6F9 365 aa17.27■□□□□ 0.36
HLA-DQB1-204ENST00000399084 SGTAO43765 313 aa17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 SCELO95171 688 aa17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 CATP04040 527 aaKnown RBP17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 GGT1P19440 569 aa17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 HNF4AP41235 474 aa17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 PRLHRP49683 370 aa17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 POLE2P56282 527 aa17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 ABRQ12979 859 aa17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 CPSF6Q16630 551 aaKnown RBP eCLIP17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 NRF1Q16656 503 aa17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 FAM98BQ52LJ0 330 aaKnown RBP17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 LRIF1Q5T3J3 769 aa17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 FRG2Q64ET8 278 aa17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 LIPIQ6XZB0 460 aa17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 HM13Q8TCT9 377 aa17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 ITCHQ96J02 903 aa17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 FOPNLQ96NB1 174 aa17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 FRG2BQ96QU4 278 aa17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 RIOK2Q9BVS4 552 aaKnown RBP17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 ACPTQ9BZG2 426 aa17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 CXXC1Q9P0U4 656 aaPredicted RBP17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 SLAMF8Q9P0V8 285 aa17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 ZNF639Q9UID6 485 aa17.27■□□□□ 0.35
HLA-DQB1-204ENST00000399084 PLXNA2O75051 1894 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 BRCA2P51587 3418 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 A0A096LPI6 279 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 RNF103-CHMP3A0A140T963 221 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 WNT9AO14904 365 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 PDYNP01213 254 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 ELFN1P0C7U0 828 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 RAP2AP10114 183 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 EPCAMP16422 314 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 LBX1P52954 281 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 NR1H2P55055 460 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 C21orf58P58505 322 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 SEMG2Q02383 582 aa17.26■□□□□ 0.35
HLA-DQB1-204ENST00000399084 FAM174BQ3ZCQ3 159 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms