RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 TMEM168Q9H0V1 697 aa18.95■□□□□ 0.62
PDLIM2-205ENST00000397761 OSGEPL1Q9H4B0 414 aa18.95■□□□□ 0.62
PDLIM2-205ENST00000397761 AASDHPPTQ9NRN7 309 aa18.95■□□□□ 0.62
PDLIM2-205ENST00000397761 ASF1AQ9Y294 204 aa18.95■□□□□ 0.62
PDLIM2-205ENST00000397761 HEATR5BQ9P2D3 2071 aa18.95■□□□□ 0.62
PDLIM2-205ENST00000397761 A6NCN8 305 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 MEI4A8MW99 385 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 MAP3K13O43283 966 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 RASGRP1O95267 797 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 ERGP11308 486 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 EPB42P16452 691 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 EPORP19235 508 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 FNTBP49356 437 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 FOXR1Q6PIV2 292 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 GPRIN3Q6ZVF9 776 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 SYVN1Q86TM6 617 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 HID1Q8IV36 788 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 LRRC56Q8IYG6 542 aaPredicted RBP18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 TBC1D21Q8IYX1 336 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 CLYBLQ8N0X4 340 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 CHCHD4Q8N4Q1 142 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 TEX9Q8N6V9 391 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 OR52B6Q8NGF0 335 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 OR5AR1Q8NGP9 310 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 AGR3Q8TD06 166 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 GPBAR1Q8TDU6 330 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 ZNF480Q8WV37 535 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 NTMT1Q9BV86 223 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 NOL11Q9H8H0 719 aaKnown RBP18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 IPPKQ9H8X2 491 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 TMEM131Q92545 1883 aa18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 SNRNP200O75643 2136 aaKnown RBP18.94■□□□□ 0.62
PDLIM2-205ENST00000397761 SDK1Q7Z5N4 2213 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 FAM86C2PA6NEL3 165 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 EBAG9O00559 213 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 AZIN1O14977 448 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 LAMTOR5O43504 91 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 CCNT2O60583 730 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 OTCP00480 354 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 TNFP01375 233 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 PRDX3P30048 256 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 IDH3AP50213 366 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 INHBCP55103 352 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 PCDH1Q08174 1060 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 TUBB3Q13509 450 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 CLCA4Q14CN2 919 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 ZSCAN26Q16670 478 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 RD3Q7Z3Z2 195 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 PARGQ86W56 976 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 LONP2Q86WA8 852 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 SPATS2Q86XZ4 545 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 NRROSQ86YC3 692 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 C1orf210Q8IVY1 113 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 TMEFF1Q8IYR6 380 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 AFAP1L2Q8N4X5 818 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 EBF4Q9BQW3 602 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 MENTQ9BUN1 341 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 TRIT1Q9H3H1 467 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 TM9SF3Q9HD45 589 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 TBC1D29Q9UFV1 150 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 KLF15Q9UIH9 416 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 KMT2EQ8IZD2 1858 aa18.93■□□□□ 0.62
PDLIM2-205ENST00000397761 KATNA1O75449 491 aa18.92■□□□□ 0.62
PDLIM2-205ENST00000397761 JUNP05412 331 aaKnown RBP18.92■□□□□ 0.62
PDLIM2-205ENST00000397761 ERVPABLB-1P60509 514 aa18.92■□□□□ 0.62
PDLIM2-205ENST00000397761 ARHGAP19Q14CB8 494 aa18.92■□□□□ 0.62
PDLIM2-205ENST00000397761 RBBP7Q16576 425 aa18.92■□□□□ 0.62
PDLIM2-205ENST00000397761 C11orf74Q86VG3 221 aa18.92■□□□□ 0.62
PDLIM2-205ENST00000397761 TMEM105Q8N8V8 129 aa18.92■□□□□ 0.62
PDLIM2-205ENST00000397761 PHC3Q8NDX5 983 aa18.92■□□□□ 0.62
PDLIM2-205ENST00000397761 CCL4L1Q8NHW4 92 aa18.92■□□□□ 0.62
PDLIM2-205ENST00000397761 MAELQ96JY0 434 aaKnown RBP18.92■□□□□ 0.62
PDLIM2-205ENST00000397761 C12orf66Q96MD2 445 aa18.92■□□□□ 0.62
PDLIM2-205ENST00000397761 LRFN3Q9BTN0 628 aa18.92■□□□□ 0.62
PDLIM2-205ENST00000397761 SGPP1Q9BX95 441 aa18.92■□□□□ 0.62
PDLIM2-205ENST00000397761 NUSAP1Q9BXS6 441 aaKnown RBP18.92■□□□□ 0.62
PDLIM2-205ENST00000397761 ATG10Q9H0Y0 220 aa18.92■□□□□ 0.62
PDLIM2-205ENST00000397761 MVB12BQ9H7P6 319 aa18.92■□□□□ 0.62
PDLIM2-205ENST00000397761 PRDM8Q9NQV8 689 aa18.92■□□□□ 0.62
PDLIM2-205ENST00000397761 DNAJC11Q9NVH1 559 aa18.92■□□□□ 0.62
PDLIM2-205ENST00000397761 TRPC5OSA6NMA1 111 aa18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 TLR4O00206 839 aa18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 WDR47O94967 919 aa18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 ENO1P06733 434 aaKnown RBP18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 AK4P27144 223 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 MAOBP27338 520 aa18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 HSD17B2P37059 387 aa18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 BLKP51451 505 aa18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 FOXA1P55317 472 aa18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 CDC16Q13042 620 aa18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 WDR45BQ5MNZ6 344 aa18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 VWA5B1Q5TIE3 1220 aa18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 CLEC6AQ6EIG7 209 aa18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 LETMD1Q6P1Q0 360 aa18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 HOMEZQ8IX15 550 aa18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 NELL1Q92832 810 aa18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 MEAF6Q9HAF1 191 aa18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 INTS7Q9NVH2 962 aaKnown RBP18.91■□□□□ 0.62
PDLIM2-205ENST00000397761 SCHIP1Q9P0W5 487 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms