RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 CCDC138Q96M89 665 aa18.91■□□□□ 0.62
MAP1LC3A-203ENST00000397709 HIST1H2AJQ99878 128 aa18.91■□□□□ 0.62
MAP1LC3A-203ENST00000397709 H2AFJQ9BTM1 129 aa18.91■□□□□ 0.62
MAP1LC3A-203ENST00000397709 IQCGQ9H095 443 aaKnown RBP18.91■□□□□ 0.62
MAP1LC3A-203ENST00000397709 C12orf65Q9H3J6 166 aaKnown RBP18.91■□□□□ 0.62
MAP1LC3A-203ENST00000397709 MED4Q9NPJ6 270 aa18.91■□□□□ 0.62
MAP1LC3A-203ENST00000397709 UTP6Q9NYH9 597 aaKnown RBP18.91■□□□□ 0.62
MAP1LC3A-203ENST00000397709 NUDT4Q9NZJ9 180 aa18.91■□□□□ 0.62
MAP1LC3A-203ENST00000397709 SPATA7Q9P0W8 599 aa18.91■□□□□ 0.62
MAP1LC3A-203ENST00000397709 CIDEBQ9UHD4 219 aa18.91■□□□□ 0.62
MAP1LC3A-203ENST00000397709 PADI4Q9UM07 663 aa18.91■□□□□ 0.62
MAP1LC3A-203ENST00000397709 PLAGL1Q9UM63 463 aa18.91■□□□□ 0.62
MAP1LC3A-203ENST00000397709 ZFHX2Q9C0A1 2572 aaPredicted RBP18.91■□□□□ 0.62
MAP1LC3A-203ENST00000397709 PABPN1LA6NDY0 278 aaKnown RBP18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 LILRA5A6NI73 299 aa18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 UBXN8O00124 270 aa18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 KDM1AO60341 852 aa18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 ERGP11308 486 aa18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 CKMT1AP12532 417 aa18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 GLB1P16278 677 aa18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 PKLRP30613 574 aa18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 RPA3P35244 121 aaPredicted RBP18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 LIMK1P53667 647 aa18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 NR1D2Q14995 579 aa18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 CDKL4Q5MAI5 379 aa18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 PDPRQ8NCN5 879 aa18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 RHBDD1Q8TEB9 315 aa18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 DENND1AQ8TEH3 1009 aa18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 EXT2Q93063 718 aa18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 ARL15Q9NXU5 204 aa18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 CPSF2Q9P2I0 782 aaKnown RBP18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 SLC17A7Q9P2U7 560 aa18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 LRIT1Q9P2V4 623 aa18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 ICKQ9UPZ9 632 aa18.9■□□□□ 0.62
MAP1LC3A-203ENST00000397709 ANKRD12Q6UB98 2062 aa18.89■□□□□ 0.62
MAP1LC3A-203ENST00000397709 EME2A4GXA9 379 aaPredicted RBP18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 SUPT3HB4E1H0 165 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 SH3BP5O60239 455 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 KLK8O60259 260 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 GFRA3O60609 400 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 CBFA2T3O75081 653 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 SUPT3HO75486 399 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 GUCA1CO95843 209 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 PNLIPP16233 465 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 RAB28P51157 221 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 SLC18A1P54219 525 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 BIRC2Q13490 618 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 MPP2Q14168 576 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ARHGAP19Q14CB8 494 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 CYP2A13Q16696 494 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ZNF761Q86XN6 746 aaPredicted RBP18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 JPH3Q8WXH2 748 aaPredicted RBP18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 FBXL8Q96CD0 374 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 CNDP2Q96KP4 475 aaKnown RBP18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 IL17FQ96PD4 163 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 FAM111AQ96PZ2 611 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 SLC38A3Q99624 504 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 NRTNQ99748 197 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 RAB11FIP5Q9BXF6 653 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 KCNK9Q9NPC2 374 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 STOX2Q9P2F5 926 aaPredicted RBP18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 TMCO1Q9UM00 188 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ZNF292O60281 2723 aa18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 GOLGA4Q13439 2230 aaKnown RBP18.89■□□□□ 0.61
MAP1LC3A-203ENST00000397709 TMEM120BA0PK00 339 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 RHPN2P1A8MT19 583 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 TM9SF1O15321 606 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ZWINTO95229 277 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 LDOC1O95751 146 aaPredicted RBP18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 SLC16A8O95907 504 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ANXA5P08758 320 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 IMPA1P29218 277 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 SHMT2P34897 504 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 HSD17B2P37059 387 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ETV4P43268 484 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 DUSP3P51452 185 aaPredicted RBP18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 GPS2Q13227 327 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 PLCL1Q15111 1095 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 HSP90B2PQ58FF3 399 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 GUSBP11Q6P575 273 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 PIP4P1Q86T03 277 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 RAB42Q8N4Z0 105 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ARMC2Q8NEN0 867 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 RDH11Q8TC12 318 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 ZNF480Q8WV37 535 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 LCN9Q8WX39 176 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 NAT6Q93015 286 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 CCDC74AQ96AQ1 378 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 RHBDF1Q96CC6 855 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 EGFL8Q99944 293 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 TBC1D10AQ9BXI6 508 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 TWSG1Q9GZX9 223 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 XKR8Q9H6D3 395 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 EVA1BQ9NVM1 165 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 CD274Q9NZQ7 290 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 FTSJ1Q9UET6 329 aa18.88■□□□□ 0.61
MAP1LC3A-203ENST00000397709 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 FAM221BA6H8Z2 402 aa18.87■□□□□ 0.61
MAP1LC3A-203ENST00000397709 NCF1BA6NI72 391 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms