RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PPM1MQ96MI6 270 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 CPNE1Q99829 537 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 MCMBPQ9BTE3 642 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 MENTQ9BUN1 341 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 THSD1Q9NS62 852 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 ACTR10Q9NZ32 417 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 OR6C2Q9NZP2 312 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 IGHV5-51A0A0C4DH38 117 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 PIPSLA2A3N6 862 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 C2orf74A8MZ97 194 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 PSIP1O75475 530 aaKnown RBP20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 CATP04040 527 aaKnown RBP20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 CHRM5P08912 532 aaPredicted RBP20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 PHBP35232 272 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 LRRC8EQ6NSJ5 796 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 MAGEC3Q8TD91 643 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 UBXN4Q92575 508 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 LINGO1Q96FE5 620 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 SPHK1Q9NYA1 384 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 SLC39A10Q9ULF5 831 aa20.53■□□□□ 0.88
TSPAN4-206ENST00000397408 RASGRF2O14827 1237 aa20.52■□□□□ 0.87
TSPAN4-206ENST00000397408 ACSL3O95573 720 aa20.52■□□□□ 0.87
TSPAN4-206ENST00000397408 CDH3P22223 829 aa20.52■□□□□ 0.87
TSPAN4-206ENST00000397408 TAS2R39P59534 338 aa20.52■□□□□ 0.87
TSPAN4-206ENST00000397408 ILF2Q12905 390 aaKnown RBP20.52■□□□□ 0.87
TSPAN4-206ENST00000397408 FBXO38Q6PIJ6 1188 aa20.52■□□□□ 0.87
TSPAN4-206ENST00000397408 CYHR1Q6ZMK1 362 aa20.52■□□□□ 0.87
TSPAN4-206ENST00000397408 BMPERQ8N8U9 685 aa20.52■□□□□ 0.87
TSPAN4-206ENST00000397408 LMNTD1Q8N9Z9 388 aa20.52■□□□□ 0.87
TSPAN4-206ENST00000397408 LINC01555Q8NAE3 123 aa20.52■□□□□ 0.87
TSPAN4-206ENST00000397408 KDF1Q8NAX2 398 aaPredicted RBP20.52■□□□□ 0.87
TSPAN4-206ENST00000397408 EEF1AKMT1Q8WVE0 214 aa20.52■□□□□ 0.87
TSPAN4-206ENST00000397408 KLHL6Q8WZ60 621 aa20.52■□□□□ 0.87
TSPAN4-206ENST00000397408 ZNF578Q96N58 590 aaPredicted RBP20.52■□□□□ 0.87
TSPAN4-206ENST00000397408 RBBP8Q99708 897 aa20.52■□□□□ 0.87
TSPAN4-206ENST00000397408 RAB11FIP5Q9BXF6 653 aa20.52■□□□□ 0.87
TSPAN4-206ENST00000397408 SIDT1Q9NXL6 827 aaKnown RBP20.52■□□□□ 0.87
TSPAN4-206ENST00000397408 SEMA5BQ9P283 1151 aa20.52■□□□□ 0.87
TSPAN4-206ENST00000397408 CDRT15L2A8MXV6 281 aa20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 B4E171 279 aa20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 PRDX3P30048 256 aaKnown RBP20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 DEKP35659 375 aaKnown RBP20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 TSPAN7P41732 249 aa20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 ERVPABLB-1P60509 514 aa20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 NAB1Q13506 487 aa20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 SPESP1Q6UW49 350 aa20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 CLEC14AQ86T13 490 aa20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 TAX1BP1Q86VP1 789 aa20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 MYO1HQ8N1T3 1032 aa20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 RAB42Q8N4Z0 105 aa20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 C2orf73Q8N5S3 287 aaPredicted RBP20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 OR2L8Q8NGY9 312 aa20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 ASB11Q8WXH4 323 aa20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 USP7Q93009 1102 aa20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 SLC41A2Q96JW4 573 aa20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 SLC39A1Q9NY26 324 aa20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 SPATA7Q9P0W8 599 aa20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 MTO1Q9Y2Z2 717 aaKnown RBP20.51■□□□□ 0.87
TSPAN4-206ENST00000397408 ADAMTS20P59510 1910 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 TLX3O43711 291 aaPredicted RBP20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 PRAMEF10O60809 474 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 FAM155BO75949 473 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 TSPAN12O95859 305 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 UGT2B7P16662 529 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 NELFEP18615 380 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 PEBP1P30086 187 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 ARL4DP49703 201 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 IL2P60568 153 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 SH3BP2P78314 561 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 ZNF460Q14592 562 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 UBE2R2Q712K3 238 aaPredicted RBP20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 TRIM73Q86UV7 250 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 PROSER1Q86XN7 944 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 RASGRP3Q8IV61 690 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 GSPT2Q8IYD1 628 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 CARFQ8N187 725 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 OR9A1PQ8NGU1 263 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 DENND1AQ8TEH3 1009 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 PMEPA1Q969W9 287 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 OR2A14Q96R47 310 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 PITPNM3Q9BZ71 974 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 TWSG1Q9GZX9 223 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 C1GALT1Q9NS00 363 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 PCDHGA7Q9Y5G6 932 aa20.5■□□□□ 0.87
TSPAN4-206ENST00000397408 AHCTF1Q8WYP5 2266 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 ISM1B1AKI9 464 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 C9orf172C9J069 976 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 MYO1CO00159 1063 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 ZBTB11O95625 1053 aaPredicted RBP20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 ZNF37AP17032 561 aaPredicted RBP20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 MAP4P27816 1152 aaKnown RBP20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 SLC5A2P31639 672 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 SLC12A2P55011 1212 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 MC2RQ01718 297 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 KIR2DS3Q14952 304 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 SLMAPQ14BN4 828 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 GRTP1Q5TC63 336 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 ANKS6Q68DC2 871 aa20.49■□□□□ 0.87
TSPAN4-206ENST00000397408 KMT5CQ86Y97 462 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms