RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 A6NCN8 305 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 LRRC14BA6NHZ5 514 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 IFRD1O00458 451 aaPredicted RBP16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 SNX2O60749 519 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 EML2O95834 649 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 GUCA1CO95843 209 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 NME1P15531 152 aaKnown RBP16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 GRK2P25098 689 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 ARRB2P32121 409 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 ACTR1BP42025 376 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 ACTR1AP61163 376 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 HERVK_113P63132 956 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 ILF3Q12906 894 aaKnown RBP eCLIP16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 STX3Q13277 289 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 CLCA4Q14CN2 919 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 TCEA2Q15560 299 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 TEAD4Q15561 434 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 CCSMST1Q4G0I0 132 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 ATG16L1Q676U5 607 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 SULT1C3Q6IMI6 304 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 ABRAXAS1Q6UWZ7 409 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 RABEPKQ7Z6M1 372 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 PPP1R14CQ8TAE6 165 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 UBTD2Q8WUN7 234 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 RHBDF1Q96CC6 855 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 MOCOSQ96EN8 888 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 LRRC61Q9BV99 259 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 C1QTNF3Q9BXJ4 246 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 TMEM121BQ9BXQ6 578 aaPredicted RBP16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 ERVK-6Q9BXR3 956 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 GSDMCQ9BYG8 508 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 TRIM54Q9BYV2 358 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 ACSS2Q9NR19 701 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 ARL15Q9NXU5 204 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 APOBEC3BQ9UH17 382 aaKnown RBP16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 ANGPTL2Q9UKU9 493 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 CFAP20Q9Y6A4 193 aaKnown RBP16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 EPG5Q9HCE0 2579 aa16.48■□□□□ 0.23
TSPAN4-205ENST00000397406 A0A1B0GVT2 93 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 SRRM3A6NNA2 597 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 PDZK1P1A8MUH7 402 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 TAPBPO15533 448 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 SH3BP5O60239 455 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 SNNO75324 88 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 SIX3O95343 332 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 S100BP04271 92 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 CELA2BP08218 269 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 RPS17P08708 135 aaKnown RBP16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 ANXA5P08758 320 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 HIST1H2AGP0C0S8 130 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 GNSP15586 552 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 HIST1H2ADP20671 130 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 MAP4P27816 1152 aaKnown RBP16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 AGTR2P50052 363 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 C21orf59P57076 290 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 UNC50Q53HI1 259 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 SLC30A9Q6PML9 568 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 ATG14Q6ZNE5 492 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 PHC3Q8NDX5 983 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 OR5AR1Q8NGP9 310 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 SKA1Q96BD8 255 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 HIST1H2AHQ96KK5 128 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 C12orf66Q96MD2 445 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 HIST1H2AJQ99878 128 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 EGFL8Q99944 293 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 TMEM79Q9BSE2 394 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 H2AFJQ9BTM1 129 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 C20orf27Q9GZN8 174 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 GSTO2Q9H4Y5 243 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 SLCO1B3Q9NPD5 702 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 SCHIP1Q9P0W5 487 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 SUSD2Q9UGT4 822 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 ASF1AQ9Y294 204 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 ASB1Q9Y576 335 aa16.47■□□□□ 0.23
TSPAN4-205ENST00000397406 TMEM114B3SHH9 223 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 MYO1CO00159 1063 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 ITM2AO43736 263 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 NPHS1O60500 1241 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 CTSEP14091 401 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 EEF1DP29692 281 aaKnown RBP16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 GGT5P36269 586 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 CTSKP43235 329 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 SEC24CP53992 1094 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 ABCE1P61221 599 aaKnown RBP16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 OCRLQ01968 901 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 GRB7Q14451 532 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 PCBP2Q15366 365 aaKnown RBP eCLIP16.46■□□□□ 0.233e-6■■■■□ 22.3
TSPAN4-205ENST00000397406 RPE65Q16518 533 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 ZXDCQ2QGD7 858 aaPredicted RBP16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 C18orf21Q32NC0 220 aaPredicted RBP16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 PRRT3Q5FWE3 981 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 FBXO48Q5FWF7 155 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 DUS1LQ6P1R4 473 aaKnown RBP16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 FRMD7Q6ZUT3 714 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 RPS27LQ71UM5 84 aaKnown RBP16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 RAB44Q7Z6P3 723 aaPredicted RBP16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 DCUN1D3Q8IWE4 304 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 LRRC34Q8IZ02 419 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 CCNYL1Q8N7R7 359 aa16.46■□□□□ 0.23
TSPAN4-205ENST00000397406 OR5K2Q8NHB8 316 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms