RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ADGRF3Q8IZF5 1079 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 LILRA3Q8N6C8 439 aaPredicted RBP9.06□□□□□ -0.96
NEDD9-203ENST00000397378 C19orf47Q8N9M1 422 aaKnown RBP9.06□□□□□ -0.96
NEDD9-203ENST00000397378 RAPGEF5Q92565 580 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 N4BP2L2Q92802 583 aaPredicted RBP9.06□□□□□ -0.96
NEDD9-203ENST00000397378 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.06□□□□□ -0.96
NEDD9-203ENST00000397378 SDCCAG3Q96C92 435 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 THOC3Q96J01 351 aaKnown RBP9.06□□□□□ -0.96
NEDD9-203ENST00000397378 C18orf12Q96KH6 178 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 TEKT5Q96M29 485 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 FERD3LQ96RJ6 166 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 LHPPQ9H008 270 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 KLHL25Q9H0H3 589 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 TXLNGQ9NUQ3 528 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 ACTR10Q9NZ32 417 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 UBP1Q9NZI7 540 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 DHCR7Q9UBM7 475 aaKnown RBP9.06□□□□□ -0.96
NEDD9-203ENST00000397378 FAM153AQ9UHL3 310 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 MEMO1Q9Y316 297 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 BZW2Q9Y6E2 419 aaKnown RBP9.06□□□□□ -0.96
NEDD9-203ENST00000397378 JMJD1CQ15652 2540 aa9.06□□□□□ -0.96
NEDD9-203ENST00000397378 NSD1Q96L73 2696 aaPredicted RBP9.05□□□□□ -0.96
NEDD9-203ENST00000397378 DYTNA2CJ06 578 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 AGAP14A8MT82 685 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 ZSCAN9O15535 394 aaPredicted RBP9.05□□□□□ -0.96
NEDD9-203ENST00000397378 RASAL1O95294 804 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 PRAMEF1O95521 474 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 ONECUT2O95948 504 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 ALBP02768 609 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 HEXAP06865 529 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 INHBBP09529 407 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 PTPN3P26045 913 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 TNNT3P45378 269 aaPredicted RBP9.05□□□□□ -0.96
NEDD9-203ENST00000397378 CD151P48509 253 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 PRLHRP49683 370 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 MYBPHQ13203 477 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 SLC1A5Q15758 541 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 FIGNQ5HY92 759 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 GLT6D1Q7Z4J2 308 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 DAAM2Q86T65 1068 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 HOOK3Q86VS8 718 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 TMEM151BQ8IW70 566 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 DNAAF3Q8N9W5 541 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 OR52E1Q8NGJ3 308 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 FKBP10Q96AY3 582 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 LMF1Q96S06 567 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 SPRTNQ9H040 489 aaPredicted RBP9.05□□□□□ -0.96
NEDD9-203ENST00000397378 OR52A5Q9H2C5 316 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 MVB12BQ9H7P6 319 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 WDR54Q9H977 334 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 MRM3Q9HC36 420 aaKnown RBP9.05□□□□□ -0.96
NEDD9-203ENST00000397378 SLC22A11Q9NSA0 550 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 ABI3Q9P2A4 366 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 FAM8A1Q9UBU6 413 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 LCMT1Q9UIC8 334 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 ST6GALNAC2Q9UJ37 374 aa9.05□□□□□ -0.96
NEDD9-203ENST00000397378 SCN2AQ99250 2005 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 FN1P02751 2386 aaKnown RBP9.04□□□□□ -0.96
NEDD9-203ENST00000397378 A0A087X0T9 212 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 TRAV17A0A0B4J275 112 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 C3orf70A6NLC5 250 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-203ENST00000397378 IFRD1O00458 451 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-203ENST00000397378 SOCS6O14544 535 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 APOL1O14791 398 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 STX7O15400 261 aaKnown RBP9.04□□□□□ -0.96
NEDD9-203ENST00000397378 HCRTR1O43613 425 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 BUD23O43709 281 aaKnown RBP9.04□□□□□ -0.96
NEDD9-203ENST00000397378 KLHL18O94889 574 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 SLCO2B1O94956 709 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 FAM228BP0C875 321 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 RALBP11234 206 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 ZFXP17010 805 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-203ENST00000397378 CD68P34810 354 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-203ENST00000397378 CHRNA4P43681 627 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 GCGRP47871 477 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 RPA4Q13156 261 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 BOP1Q14137 746 aaKnown RBP9.04□□□□□ -0.96
NEDD9-203ENST00000397378 PCOLCEQ15113 449 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 ZIC1Q15915 447 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 STX1AQ16623 288 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 SLC5A12Q1EHB4 618 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 DEFB110Q30KQ9 67 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 FILIP1LQ4L180 1135 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 ZNF658BQ4V348 819 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-203ENST00000397378 ALKBH5Q6P6C2 394 aaKnown RBP9.04□□□□□ -0.96
NEDD9-203ENST00000397378 SASS6Q6UVJ0 657 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 KIRREL2Q6UWL6 708 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 OVCH1Q7RTY7 1134 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 SLC25A41Q8N5S1 370 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 ZNF655Q8N720 491 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-203ENST00000397378 BLOC1S5Q8TDH9 187 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-203ENST00000397378 NAT14Q8WUY8 206 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 SYN2Q92777 582 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-203ENST00000397378 RBM41Q96IZ5 413 aaKnown RBP9.04□□□□□ -0.96
NEDD9-203ENST00000397378 VPS50Q96JG6 964 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 MRGPRX2Q96LB1 330 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 ALPK1Q96QP1 1244 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 NRTNQ99748 197 aa9.04□□□□□ -0.96
NEDD9-203ENST00000397378 SLC26A1Q9H2B4 701 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms