RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 PRKG2Q13237 762 aa14.13□□□□□ -0.15
SEC13-208ENST00000397109 ANKRD20A4Q4UJ75 823 aa14.13□□□□□ -0.15
SEC13-208ENST00000397109 SOWAHCQ53LP3 525 aaPredicted RBP14.13□□□□□ -0.15
SEC13-208ENST00000397109 TMTC4Q5T4D3 741 aa14.13□□□□□ -0.15
SEC13-208ENST00000397109 VASH2Q86V25 355 aa14.13□□□□□ -0.15
SEC13-208ENST00000397109 PPP1R3BQ86XI6 285 aa14.13□□□□□ -0.15
SEC13-208ENST00000397109 RASGRP3Q8IV61 690 aa14.13□□□□□ -0.15
SEC13-208ENST00000397109 SLC22A15Q8IZD6 547 aa14.13□□□□□ -0.15
SEC13-208ENST00000397109 ESX1Q8N693 406 aa14.13□□□□□ -0.15
SEC13-208ENST00000397109 OR5K2Q8NHB8 316 aa14.13□□□□□ -0.15
SEC13-208ENST00000397109 FAM76AQ8TAV0 307 aa14.13□□□□□ -0.15
SEC13-208ENST00000397109 GSDMBQ8TAX9 411 aa14.13□□□□□ -0.15
SEC13-208ENST00000397109 WBP1Q96G27 269 aa14.13□□□□□ -0.15
SEC13-208ENST00000397109 P2RY12Q9H244 342 aa14.13□□□□□ -0.15
SEC13-208ENST00000397109 TMBIM4Q9HC24 238 aa14.13□□□□□ -0.15
SEC13-208ENST00000397109 POMT2Q9UKY4 750 aa14.13□□□□□ -0.15
SEC13-208ENST00000397109 RARRES3Q9UL19 164 aa14.13□□□□□ -0.15
SEC13-208ENST00000397109 VPS9D1Q9Y2B5 631 aa14.13□□□□□ -0.15
SEC13-208ENST00000397109 MGAQ8IWI9 3026 aa14.13□□□□□ -0.15
SEC13-208ENST00000397109 GSAPA4D1B5 854 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 EIF4E1BA6NMX2 242 aaKnown RBP14.12□□□□□ -0.15
SEC13-208ENST00000397109 C2orf74A8MZ97 194 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 GOLGA8MH3BSY2 632 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 TK2O00142 265 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 ATXN7O15265 892 aaPredicted RBP14.12□□□□□ -0.15
SEC13-208ENST00000397109 EIF3HO15372 352 aaKnown RBP eCLIP14.12□□□□□ -0.15
SEC13-208ENST00000397109 MAP3K7O43318 606 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 SLCO2B1O94956 709 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 DLGAP3O95886 979 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 OGNP20774 298 aaKnown RBP14.12□□□□□ -0.15
SEC13-208ENST00000397109 CDH3P22223 829 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 AOAHP28039 575 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 ARCN1P48444 511 aaKnown RBP14.12□□□□□ -0.15
SEC13-208ENST00000397109 ADARP55265 1226 aaKnown RBP14.12□□□□□ -0.15
SEC13-208ENST00000397109 TUBB3Q13509 450 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 HIF1AQ16665 826 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 TYSND1Q2T9J0 566 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.12□□□□□ -0.15
SEC13-208ENST00000397109 NEPROQ6NW34 567 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 NAPRTQ6XQN6 538 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 TMEM135Q86UB9 458 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 PDIK1LQ8N165 341 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 AGGF1Q8N302 714 aaeCLIP14.12□□□□□ -0.15
SEC13-208ENST00000397109 D2HGDHQ8N465 521 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 ARFGAP2Q8N6H7 521 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 OR5AR1Q8NGP9 310 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 OR8K5Q8NH50 307 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 KIAA1143Q96AT1 154 aaPredicted RBP14.12□□□□□ -0.15
SEC13-208ENST00000397109 LRRC39Q96DD0 335 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 ATP6V1G3Q96LB4 118 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 SIGLEC10Q96LC7 697 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 ULBP3Q9BZM4 244 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 BTRCQ9Y297 605 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 IQCF5A8MTL0 148 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 BTN3A1O00481 513 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 SPAG6O75602 509 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 ESR1P03372 595 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 MT-ND3P03897 115 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 FOLR1P15328 257 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 PRDX3P30048 256 aaKnown RBP14.12□□□□□ -0.15
SEC13-208ENST00000397109 CSE1LP55060 971 aaKnown RBP14.12□□□□□ -0.15
SEC13-208ENST00000397109 ARL4CP56559 192 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 IFFO1Q0D2I5 559 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 SRSF6Q13247 344 aaKnown RBP14.12□□□□□ -0.15
SEC13-208ENST00000397109 THOC5Q13769 683 aaKnown RBP14.12□□□□□ -0.15
SEC13-208ENST00000397109 CEP85LQ5SZL2 805 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 OTOAQ7RTW8 1153 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 ZNF669Q96BR6 464 aaPredicted RBP14.12□□□□□ -0.15
SEC13-208ENST00000397109 PGM2Q96G03 612 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 STMN4Q9H169 189 aaPredicted RBP14.12□□□□□ -0.15
SEC13-208ENST00000397109 SYTL2Q9HCH5 934 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 FGF21Q9NSA1 209 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 SOHLH2Q9NX45 425 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 OR6C2Q9NZP2 312 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 CDYLQ9Y232 598 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 TDRKHQ9Y2W6 561 aaKnown RBP14.12□□□□□ -0.15
SEC13-208ENST00000397109 PCDHGA4Q9Y5G9 962 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 MAD1L1Q9Y6D9 718 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 RPS6KL1Q9Y6S9 549 aa14.12□□□□□ -0.15
SEC13-208ENST00000397109 PIPSLA2A3N6 862 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 GOLGA8TH3BQL2 631 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 BTN3A3O00478 584 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 RIPK2O43353 540 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 USP1O94782 785 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 TTC4O95801 387 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 ZNF844Q08AG5 666 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 SLC29A2Q14542 456 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 GLIPR1L2Q4G1C9 344 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 MSS51Q4VC12 460 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 TAF1BQ53T94 588 aaPredicted RBP14.11□□□□□ -0.15
SEC13-208ENST00000397109 PLEKHS1Q5SXH7 462 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 C6orf15Q6UXA7 325 aaPredicted RBP14.11□□□□□ -0.15
SEC13-208ENST00000397109 UNC5DQ6UXZ4 953 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 TIPARPQ7Z3E1 657 aaKnown RBP14.11□□□□□ -0.15
SEC13-208ENST00000397109 CILP2Q8IUL8 1156 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 LMNTD2Q8IXW0 634 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 ADGRF3Q8IZF5 1079 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 LKAAEAR1Q8TD35 194 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 CALML6Q8TD86 181 aa14.11□□□□□ -0.15
SEC13-208ENST00000397109 LPGAT1Q92604 370 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms