RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 GIPC1O14908 333 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 PRPF4O43172 522 aaKnown RBP eCLIP10.27□□□□□ -0.77
NUP98-205ENST00000397007 ZBTB14O43829 449 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 TRIM16O95361 564 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 SYF2O95926 243 aaKnown RBP10.27□□□□□ -0.77
NUP98-205ENST00000397007 ONECUT2O95948 504 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 CTSEP14091 401 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 SHC2P98077 582 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 TAP2Q03519 686 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 OTOAQ7RTW8 1153 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 FAM46DQ8NEK8 389 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 ELMO2Q96JJ3 720 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 CCDC3Q9BQI4 270 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 ABCG4Q9H172 646 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 SYTL2Q9HCH5 934 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 STOX2Q9P2F5 926 aaPredicted RBP10.27□□□□□ -0.77
NUP98-205ENST00000397007 ACSL6Q9UKU0 697 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 D6RAR5 112 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 TBX6O95947 436 aaPredicted RBP10.27□□□□□ -0.77
NUP98-205ENST00000397007 PROCP04070 461 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 ALPPL2P10696 532 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 SDHBP21912 280 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 CASP2P42575 452 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 TRIP6Q15654 476 aaKnown RBP10.27□□□□□ -0.77
NUP98-205ENST00000397007 EXOC3L1Q86VI1 746 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 LMNTD1Q8N9Z9 388 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 FAM122AQ96E09 287 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 CABS1Q96KC9 395 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 LRRN3Q9H3W5 708 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 LRIT1Q9P2V4 623 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 SH2B3Q9UQQ2 575 aa10.27□□□□□ -0.77
NUP98-205ENST00000397007 KCNE1BA0A087WTH5 132 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 PHGDHO43175 533 aaKnown RBP10.26□□□□□ -0.77
NUP98-205ENST00000397007 OPA1O60313 960 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 RFPL3O75679 317 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 KPNA2P52292 529 aaKnown RBP10.26□□□□□ -0.77
NUP98-205ENST00000397007 AP1S2P56377 157 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 IL2P60568 153 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 MPP2Q14168 576 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 FASTKQ14296 549 aaKnown RBP10.26□□□□□ -0.77
NUP98-205ENST00000397007 PCBP2Q15366 365 aaKnown RBP eCLIP10.26□□□□□ -0.77
NUP98-205ENST00000397007 TTC23LQ6PF05 361 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 RNF165Q6ZSG1 346 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 WDR48Q8TAF3 677 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 NXNL1Q96CM4 212 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 LIN37Q96GY3 246 aaPredicted RBP10.26□□□□□ -0.77
NUP98-205ENST00000397007 C12orf66Q96MD2 445 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 TRMT6Q9UJA5 497 aaKnown RBP10.26□□□□□ -0.77
NUP98-205ENST00000397007 ZFHX2Q9C0A1 2572 aaPredicted RBP10.26□□□□□ -0.77
NUP98-205ENST00000397007 IGHV5-10-1A0A0J9YXX1 117 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 TRIM49D1C9J1S8 452 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 FFAR2O15552 330 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 LTA4HP09960 611 aaKnown RBP10.26□□□□□ -0.77
NUP98-205ENST00000397007 ITGB6P18564 788 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 BDKRB1P46663 353 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 RAB28P51157 221 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 PPP1CAP62136 330 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 CCL7P80098 99 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 MAP9Q49MG5 647 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 MROH9Q5TGP6 573 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 FCRL6Q6DN72 434 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 ALYREFQ86V81 257 aaKnown RBP10.26□□□□□ -0.77
NUP98-205ENST00000397007 OR9A1PQ8NGU1 263 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 TMEM159Q96B96 161 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 L3HYPDHQ96EM0 354 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 TBC1D10AQ9BXI6 508 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 TMEM9Q9P0T7 183 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 ANKMY1Q9P2S6 941 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 FTSJ1Q9UET6 329 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 SLC39A10Q9ULF5 831 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 A0A096LPK6 155 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 B4DGG1 531 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 CHRM5P08912 532 aaPredicted RBP10.26□□□□□ -0.77
NUP98-205ENST00000397007 SLC35G4P0C7Q5 338 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 MSH2P43246 934 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 TGFBIQ15582 683 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 ZIC1Q15915 447 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 TTLL9Q3SXZ7 439 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 RNF44Q7L0R7 432 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 RD3Q7Z3Z2 195 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 PHC3Q8NDX5 983 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 ABHD11Q8NFV4 315 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 GDAP1Q8TB36 358 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 GRAMD1AQ96CP6 724 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 TRIT1Q9H3H1 467 aaKnown RBP10.26□□□□□ -0.77
NUP98-205ENST00000397007 ZNF358Q9NW07 568 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 SPHK1Q9NYA1 384 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 PSMD13Q9UNM6 376 aa10.26□□□□□ -0.77
NUP98-205ENST00000397007 ANKRD12Q6UB98 2062 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 KRT38O76015 456 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 UBXN7O94888 489 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 RPS17P08708 135 aaKnown RBP10.25□□□□□ -0.77
NUP98-205ENST00000397007 FTH1P19P0C7X4 201 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 HOXB3P14651 431 aaPredicted RBP10.25□□□□□ -0.77
NUP98-205ENST00000397007 CREB1P16220 341 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 CHRM3P20309 590 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 OR1D5P58170 312 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 HSPA14Q0VDF9 509 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 SETDB1Q15047 1291 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 TTMPQ5BVD1 217 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms