RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 KRT6AP02538 564 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 KRT6BP04259 564 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 ZNF23P17027 643 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 KRT6CP48668 564 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 CDH15P55291 814 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 CYP4F3Q08477 520 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 PLPP4Q5VZY2 271 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 FAM86B1Q8N7N1 296 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 ZNF548Q8NEK5 533 aaPredicted RBP16.15■□□□□ 0.18
TRIM39-205ENST00000396551 OR10A6Q8NH74 314 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 CYB5D2Q8WUJ1 264 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 CLP1Q92989 425 aaKnown RBP16.15■□□□□ 0.18
TRIM39-205ENST00000396551 FBXL20Q96IG2 436 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 VPS50Q96JG6 964 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 MTG2Q9H4K7 406 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 ERVW-1Q9UQF0 538 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 GFYI3L273 518 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 UPK1AO00322 258 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 IL6P05231 212 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 ADRM1Q16186 407 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 GGTA1PQ4G0N0 100 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 PLEKHS1Q5SXH7 462 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 ZNF648Q5T619 568 aaPredicted RBP16.15■□□□□ 0.18
TRIM39-205ENST00000396551 BEND7Q8N7W2 519 aaPredicted RBP16.15■□□□□ 0.18
TRIM39-205ENST00000396551 NAT16Q8N8M0 369 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 FRS2Q8WU20 508 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 OSCP1Q8WVF1 389 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 SELENOMQ8WWX9 145 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 MRGPRX3Q96LB0 322 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 CCDC115Q96NT0 180 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.15■□□□□ 0.18
TRIM39-205ENST00000396551 TRBV5-3A0A0A0MS03 114 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 ZBBXA8MT70 800 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 TTC34A8MYJ7 566 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 VIPR1P32241 457 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 ALDH3B2P48448 385 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 RUNDC3AQ59EK9 446 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 TTC23LQ6PF05 361 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 Q6ZVL8 140 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 OR2T12Q8NG77 320 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 TMIGD2Q96BF3 282 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 CLK4Q9HAZ1 481 aaKnown RBP16.15■□□□□ 0.18
TRIM39-205ENST00000396551 DMTF1Q9Y222 760 aa16.15■□□□□ 0.18
TRIM39-205ENST00000396551 KIAA0355O15063 1070 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 LEFTY1O75610 366 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 RHOP08100 348 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 C7P10643 843 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 NFKBIAP25963 317 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 RPS14P62263 151 aaKnown RBP16.14■□□□□ 0.17
TRIM39-205ENST00000396551 POLR2LP62875 67 aaKnown RBP16.14■□□□□ 0.17
TRIM39-205ENST00000396551 ZNF77Q15935 545 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 NKG7Q16617 165 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 ELMSAN1Q6PJG2 1045 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 TCAIMQ8N3R3 496 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 ITFG1Q8TB96 612 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 CYGBQ8WWM9 190 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 HAUS8Q9BT25 410 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 SOX17Q9H6I2 414 aaPredicted RBP16.14■□□□□ 0.17
TRIM39-205ENST00000396551 C8orf4Q9NR00 106 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 SLC22A14Q9Y267 594 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 CEPT1Q9Y6K0 416 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 A0A1W2PQ67 120 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 H3BSA7 217 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 ARHGEF15O94989 841 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 B3GALT4O96024 378 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 CTSLP07711 333 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 TACR1P25103 407 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 ETV3P41162 512 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 RPS9P46781 194 aaKnown RBP16.14■□□□□ 0.17
TRIM39-205ENST00000396551 NTHL1P78549 312 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.14■□□□□ 0.17
TRIM39-205ENST00000396551 CYBRD1Q53TN4 286 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 ARSIQ5FYB1 569 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 BORAQ6PGQ7 559 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 BRAT1Q6PJG6 821 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 KIAA0907Q7Z7F0 614 aaPredicted RBP16.14■□□□□ 0.17
TRIM39-205ENST00000396551 L3MBTL4Q8NA19 623 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 HM13Q8TCT9 377 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 MAGEE2Q8TD90 523 aaPredicted RBP16.14■□□□□ 0.17
TRIM39-205ENST00000396551 FIG4Q92562 907 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 OR52E6Q96RD3 313 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 HEPHQ9BQS7 1158 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 THUMPD3Q9BV44 507 aaKnown RBP16.14■□□□□ 0.17
TRIM39-205ENST00000396551 PAIP1Q9H074 479 aaKnown RBP16.14■□□□□ 0.17
TRIM39-205ENST00000396551 FAM83DQ9H4H8 585 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 SMPD3Q9NY59 655 aaPredicted RBP16.14■□□□□ 0.17
TRIM39-205ENST00000396551 SLC8A2Q9UPR5 921 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 IRAK3Q9Y616 596 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 WNT6Q9Y6F9 365 aa16.14■□□□□ 0.17
TRIM39-205ENST00000396551 CCDC160A6NGH7 325 aa16.13■□□□□ 0.17
TRIM39-205ENST00000396551 FADS2P1A8MWK0 482 aa16.13■□□□□ 0.17
TRIM39-205ENST00000396551 CLOCKO15516 846 aa16.13■□□□□ 0.17
TRIM39-205ENST00000396551 TULP3O75386 442 aa16.13■□□□□ 0.17
TRIM39-205ENST00000396551 ZNF30P17039 623 aa16.13■□□□□ 0.17
TRIM39-205ENST00000396551 ITPKAP23677 461 aa16.13■□□□□ 0.17
TRIM39-205ENST00000396551 ENPP6Q6UWR7 440 aa16.13■□□□□ 0.17
TRIM39-205ENST00000396551 RASGRP3Q8IV61 690 aa16.13■□□□□ 0.17
TRIM39-205ENST00000396551 PLPP6Q8IY26 295 aa16.13■□□□□ 0.17
TRIM39-205ENST00000396551 PHACTR4Q8IZ21 702 aa16.13■□□□□ 0.17
TRIM39-205ENST00000396551 C10orf111Q8N326 155 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms