RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 IKZF5Q9H5V7 419 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 IGLV3-16A0A075B6K0 115 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 ARNTLO00327 626 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 SEC24DO94855 1032 aaPredicted RBP14.34□□□□□ -0.11
CDH16-202ENST00000394055 KCNH1O95259 989 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 ASLP04424 464 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 CBSLP0DN79 551 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 PCNAP12004 261 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 CBSP35520 551 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 PTPN5P54829 565 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 MAP7Q14244 749 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 MAPKAPK3Q16644 382 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 SPATS1Q496A3 300 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 GPR65Q8IYL9 337 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 SLC22A15Q8IZD6 547 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 SELENOMQ8WWX9 145 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 FIG4Q92562 907 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 P2RY13Q9BPV8 354 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 TBCDQ9BTW9 1192 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 MUC13Q9H3R2 512 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 SOX17Q9H6I2 414 aaPredicted RBP14.34□□□□□ -0.11
CDH16-202ENST00000394055 PARVBQ9HBI1 364 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 SLC22A14Q9Y267 594 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 DLGAP4Q9Y2H0 992 aa14.34□□□□□ -0.11
CDH16-202ENST00000394055 B3GALT4O96024 378 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 HIST1H2AGP0C0S8 130 aaPredicted RBP14.33□□□□□ -0.11
CDH16-202ENST00000394055 HIST1H2ADP20671 130 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 APOFQ13790 326 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 NEK5Q6P3R8 708 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 TRIM46Q7Z4K8 759 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 OR10A6Q8NH74 314 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 CYGBQ8WWM9 190 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 ELMO1Q92556 727 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 TFAP2CQ92754 450 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 GTF2H4Q92759 462 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 FOXJ1Q92949 421 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 PPP1R14BQ96C90 147 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 HIST1H2AHQ96KK5 128 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 HIST1H2AJQ99878 128 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 H2AFJQ9BTM1 129 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 CHID1Q9BWS9 393 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 CEP44Q9C0F1 390 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 C1orf109Q9NX04 203 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 PKD2L2Q9NZM6 624 aa14.33□□□□□ -0.11
CDH16-202ENST00000394055 KANSL1LA0AUZ9 987 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 DYTNA2CJ06 578 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 PABPN1LA6NDY0 278 aaKnown RBP14.33□□□□□ -0.12
CDH16-202ENST00000394055 TMEM202A6NGA9 273 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 ACOX3O15254 700 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 NPPAP01160 153 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 KRT6AP02538 564 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 KRT6BP04259 564 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 BCKDHAP12694 445 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 CTNNB1P35222 781 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 KRT6CP48668 564 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 CDH15P55291 814 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 ATP6AP1Q15904 470 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 INTS11Q5TA45 600 aaKnown RBP14.33□□□□□ -0.12
CDH16-202ENST00000394055 ST13P5Q8NFI4 369 aaPredicted RBP14.33□□□□□ -0.12
CDH16-202ENST00000394055 TSPAN14Q8NG11 270 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 ASB11Q8WXH4 323 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 USP7Q93009 1102 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 TSSK3Q96PN8 268 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 C9orf16Q9BUW7 83 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 ANKRD60Q9BZ19 345 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 FAM83DQ9H4H8 585 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 ELOVL6Q9H5J4 265 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 PCDH12Q9NPG4 1184 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 ERVW-1Q9UQF0 538 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 HELZP42694 1942 aaKnown RBP14.33□□□□□ -0.12
CDH16-202ENST00000394055 A0A0J9YVX5 310 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 SMIM31A0A1B0GVY4 71 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 PGRP06401 933 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 EPCAMP16422 314 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 PTPN2P17706 415 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 POLR2EP19388 210 aaKnown RBP14.33□□□□□ -0.12
CDH16-202ENST00000394055 POLR2LP62875 67 aaKnown RBP14.33□□□□□ -0.12
CDH16-202ENST00000394055 ELMSAN1Q6PJG2 1045 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 ANKRD46Q86W74 232 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 PHACTR4Q8IZ21 702 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 FAM86B1Q8N7N1 296 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 MRPL43Q8N983 215 aaKnown RBP14.33□□□□□ -0.12
CDH16-202ENST00000394055 GOLM1Q8NBJ4 401 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 MAGEE2Q8TD90 523 aaPredicted RBP14.33□□□□□ -0.12
CDH16-202ENST00000394055 GFM2Q969S9 779 aaKnown RBP14.33□□□□□ -0.12
CDH16-202ENST00000394055 AURKBQ96GD4 344 aaPredicted RBP14.33□□□□□ -0.12
CDH16-202ENST00000394055 FBXL20Q96IG2 436 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 ZNF583Q96ND8 569 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 OR52E6Q96RD3 313 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 ARPC5LQ9BPX5 153 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 ADI1Q9BV57 179 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 RIOK2Q9BVS4 552 aaKnown RBP14.33□□□□□ -0.12
CDH16-202ENST00000394055 SLC12A9Q9BXP2 914 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 SLC6A13Q9NSD5 602 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 OLAHQ9NV23 265 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 PCDHB3Q9Y5E6 796 aa14.33□□□□□ -0.12
CDH16-202ENST00000394055 C5orf42Q9H799 3197 aa14.32□□□□□ -0.12
CDH16-202ENST00000394055 CARNS1A5YM72 827 aa14.32□□□□□ -0.12
CDH16-202ENST00000394055 PRAMEF4O60810 478 aa14.32□□□□□ -0.12
CDH16-202ENST00000394055 LRATO95237 230 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms