RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 SOBPA7XYQ1 873 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 ERN1O75460 977 aaKnown RBP18.42■□□□□ 0.54
CBX1-202ENST00000393408 E2F6O75461 281 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 EPB42P16452 691 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 HMGA1P17096 107 aaKnown RBP18.42■□□□□ 0.54
CBX1-202ENST00000393408 ACRV1P26436 265 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 ZC3H12BQ5HYM0 836 aaKnown RBP18.42■□□□□ 0.54
CBX1-202ENST00000393408 FBLIM1Q8WUP2 373 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 ULK4Q96C45 1275 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 NODALQ96S42 347 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 KLF16Q9BXK1 252 aaPredicted RBP18.42■□□□□ 0.54
CBX1-202ENST00000393408 SLC29A3Q9BZD2 475 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 KCNH6Q9H252 994 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 ELAC1Q9H777 363 aaKnown RBP18.42■□□□□ 0.54
CBX1-202ENST00000393408 ZFYVE1Q9HBF4 777 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 IL26Q9NPH9 171 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 MAN2B2Q9Y2E5 1009 aa18.42■□□□□ 0.54
CBX1-202ENST00000393408 A0A096LPI6 279 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 CFAP99D6REC4 459 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 DNAJB5O75953 348 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 FUCA1P04066 466 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 BMP1P13497 986 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 PFKLP17858 780 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 ITGALP20701 1170 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 RYKP34925 604 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 GP2P55259 537 aaKnown RBP18.41■□□□□ 0.54
CBX1-202ENST00000393408 PHEXP78562 749 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 IL18R1Q13478 541 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 GPR162Q16538 588 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 ARL10Q8N8L6 244 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 ABHD11Q8NFV4 315 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 BCL7CQ8WUZ0 217 aaPredicted RBP18.41■□□□□ 0.54
CBX1-202ENST00000393408 FAM120BQ96EK7 910 aaKnown RBP18.41■□□□□ 0.54
CBX1-202ENST00000393408 RDH14Q9HBH5 336 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 VPS51Q9UID3 782 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 ERGIC3Q9Y282 383 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 PCDHB7Q9Y5E2 793 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 OR51B4Q9Y5P0 310 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 FUOMA2VDF0 154 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 ARVCFO00192 962 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 HOXB9P17482 250 aaPredicted RBP18.41■□□□□ 0.54
CBX1-202ENST00000393408 AP1S1P61966 158 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 GSTM4Q03013 218 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 KCNC4Q03721 635 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 VAC14Q08AM6 782 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 RFX4Q33E94 735 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 MACC1Q6ZN28 852 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 MBOAT1Q6ZNC8 495 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 ANKRD13BQ86YJ7 626 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 HIPK1Q86Z02 1210 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 PYURFQ96I23 114 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 ACPTQ9BZG2 426 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 EXD2Q9NVH0 621 aa18.41■□□□□ 0.54
CBX1-202ENST00000393408 TBL1XO60907 577 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 XYLBO75191 536 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 RECQL5O94762 991 aaPredicted RBP18.4■□□□□ 0.54
CBX1-202ENST00000393408 INMTO95050 263 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 GALTP07902 379 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 CCDC159P0C7I6 412 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 HOXB6P17509 224 aaKnown RBP18.4■□□□□ 0.54
CBX1-202ENST00000393408 TUFMP49411 452 aaKnown RBP18.4■□□□□ 0.54
CBX1-202ENST00000393408 RAD23AP54725 363 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 CLDN8P56748 225 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 RPS14P62263 151 aaKnown RBP18.4■□□□□ 0.54
CBX1-202ENST00000393408 ATP1A4Q13733 1029 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 SPIDRQ14159 915 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 NAT16Q8N8M0 369 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 OR6K2Q8NGY2 324 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 ZNF566Q969W8 418 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 MTFMTQ96DP5 389 aaKnown RBP18.4■□□□□ 0.54
CBX1-202ENST00000393408 TRPM5Q9NZQ8 1165 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 DLGAP4Q9Y2H0 992 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 U3KQV3 271 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 PTGES3LE9PB15 166 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 K7ERQ8 282 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 STK16O75716 305 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 ITGAMP11215 1152 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 RPL17P18621 184 aaKnown RBP18.4■□□□□ 0.54
CBX1-202ENST00000393408 NR4A1P22736 598 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 PTPN6P29350 595 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 CDK5R2Q13319 367 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 CTF1Q16619 201 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 GRAMD4Q6IC98 578 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 CES5AQ6NT32 575 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 DET1Q7L5Y6 550 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 IGFN1Q86VF2 1251 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 POP5Q969H6 163 aaKnown RBP18.4■□□□□ 0.54
CBX1-202ENST00000393408 INPP5KQ9BT40 448 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 TM6SF2Q9BZW4 377 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 TRIT1Q9H3H1 467 aaKnown RBP18.4■□□□□ 0.54
CBX1-202ENST00000393408 RRAGCQ9HB90 399 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 VNN3Q9NY84 501 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 DNMT3BQ9UBC3 853 aaKnown RBP18.4■□□□□ 0.54
CBX1-202ENST00000393408 FBXO10Q9UK96 956 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 ORC6Q9Y5N6 252 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 DGKBQ9Y6T7 804 aa18.4■□□□□ 0.54
CBX1-202ENST00000393408 C2orf78A6NCI8 922 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 BCKDKO14874 412 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 ARHGEF15O94989 841 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 CLDN9O95484 217 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms