RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 TNIP1Q15025 636 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 EFTUD2Q15029 972 aaKnown RBP eCLIP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 ADIPOQQ15848 244 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 MS4A18Q3C1V0 323 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 ITPRIPL2Q3MIP1 535 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 DPCR1Q3MIW9 517 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 MAP9Q49MG5 647 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 GAGE2EQ4V326 116 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 INTS11Q5TA45 600 aaKnown RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 MARC1Q5VT66 337 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 AGAP7PQ5VUJ5 663 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 RNLSQ5VYX0 342 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 NAA35Q5VZE5 725 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 TMEM198Q66K66 360 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 GAGE2AQ6NT46 116 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 CDC73Q6P1J9 531 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 ZNF530Q6P9A1 599 aaPredicted RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 IGFL2Q6UWQ7 119 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 SEPT14Q6ZU15 432 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 G2E3Q7L622 706 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 HIST3H2AQ7L7L0 130 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 COMMD2Q86X83 199 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 CATSPERDQ86XM0 798 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 CPOQ8IVL8 374 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 FAM114A1Q8IWE2 563 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 CFAP206Q8IYR0 622 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 MAML2Q8IZL2 1156 aaPredicted RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 CNTROBQ8N137 903 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 AFAP1Q8N556 730 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 TSPYL6Q8N831 410 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 OR13C3Q8NGS6 347 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 OR13J1Q8NGT2 312 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 OR1L3Q8NH93 324 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 EXD1Q8NHP7 514 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 C9orf43Q8TAL5 461 aaPredicted RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 TBC1D16Q8TBP0 767 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 ZNF721Q8TF20 911 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 APOBEC4Q8WW27 367 aaKnown RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 IRGQQ8WZA9 623 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 NSMAFQ92636 917 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 TRIM63Q969Q1 353 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 ESAMQ96AP7 390 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 HVCN1Q96D96 273 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 MTERF3Q96E29 417 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 MAELQ96JY0 434 aaKnown RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 UBXN10Q96LJ8 280 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 SPAG5Q96R06 1193 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 GAD1Q99259 594 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 DDOQ99489 341 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 SEPT5Q99719 369 aaPredicted RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 MAP3K3Q99759 626 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 ATF6BQ99941 703 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 RTBDNQ9BSG5 229 aaPredicted RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 HGH1Q9BTY7 390 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 STRA6Q9BX79 667 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 KRTAP4-1Q9BYQ7 146 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 OR2B2Q9GZK3 357 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 VN1R1Q9GZP7 353 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 SHARPINQ9H0F6 387 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 WNT5BQ9H1J7 359 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 ARRDC1-AS1Q9H2J1 176 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 PNNQ9H307 717 aaKnown RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 CPVLQ9H3G5 476 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 JPT2Q9H910 190 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 HHATLQ9HCP6 504 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 MYOZ2Q9NPC6 264 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 FGF21Q9NSA1 209 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 SMC4Q9NTJ3 1288 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 P4HTMQ9NXG6 502 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 TRMT1Q9NXH9 659 aaKnown RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 GAGE2DQ9UEU5 116 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 BAIAP2L1Q9UHR4 511 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 GTF3C4Q9UKN8 822 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 TSPAN16Q9UKR8 245 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 ZHX1Q9UKY1 873 aaPredicted RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP0.37□□□□□ -2.35
SNORD28-201ENST00000384706 A0A1W2PQ72 361 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 A0A1W2PRG0 241 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 WI2-2373I1.2A0A1W2PRP0 233 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 HYKKA2RU49 373 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 ENO4A6NNW6 628 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 SNURFLB1AK76 121 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 E9PAM4 449 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 NPIPB9F8W1W9 429 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 K7ENM7 598 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 SLC33A1O00400 549 aaPredicted RBP0.37□□□□□ -2.35
SNORD28-201ENST00000384706 TO15178 435 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 NDUFS4O43181 175 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 TNFSF14O43557 240 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 PLIN1O60240 522 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 PAGE4O60829 102 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 NDUFS3O75489 264 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 DAB1O75553 588 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 BCL10O95999 233 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 GH2P01242 217 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 VTNP04004 478 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 SPARCP09486 303 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 ALOX5P09917 674 aa0.37□□□□□ -2.35
SNORD28-201ENST00000384706 FAM200BP0CF97 657 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms