RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 PRR19A6NJB7 356 aa26.09■■□□□ 1.77
MSX1-201ENST00000382723 DCTN3O75935 186 aa26.09■■□□□ 1.77
MSX1-201ENST00000382723 OR4F21O95013 312 aa26.09■■□□□ 1.77
MSX1-201ENST00000382723 IMPA1P29218 277 aa26.09■■□□□ 1.77
MSX1-201ENST00000382723 CCNG1P51959 295 aa26.09■■□□□ 1.77
MSX1-201ENST00000382723 ERVPABLB-1P60509 514 aa26.09■■□□□ 1.77
MSX1-201ENST00000382723 NAE1Q13564 534 aa26.09■■□□□ 1.77
MSX1-201ENST00000382723 ZNF542PQ5EBM4 170 aa26.09■■□□□ 1.77
MSX1-201ENST00000382723 CAPRIN2Q6IMN6 1127 aaKnown RBP26.09■■□□□ 1.77
MSX1-201ENST00000382723 LAYNQ6UX15 382 aa26.09■■□□□ 1.77
MSX1-201ENST00000382723 LRRC70Q7Z2Q7 622 aa26.09■■□□□ 1.77
MSX1-201ENST00000382723 FITM2Q8N6M3 262 aa26.09■■□□□ 1.77
MSX1-201ENST00000382723 OR9A1PQ8NGU1 263 aa26.09■■□□□ 1.77
MSX1-201ENST00000382723 LRRC37BQ96QE4 947 aa26.09■■□□□ 1.77
MSX1-201ENST00000382723 INSM2Q96T92 566 aaPredicted RBP26.09■■□□□ 1.77
MSX1-201ENST00000382723 STN1Q9H668 368 aaKnown RBP26.09■■□□□ 1.77
MSX1-201ENST00000382723 PLAGL1Q9UM63 463 aa26.09■■□□□ 1.77
MSX1-201ENST00000382723 APOBEC2Q9Y235 224 aaKnown RBP26.09■■□□□ 1.77
MSX1-201ENST00000382723 SLC22A14Q9Y267 594 aa26.09■■□□□ 1.77
MSX1-201ENST00000382723 TIMM22Q9Y584 194 aa26.09■■□□□ 1.77
MSX1-201ENST00000382723 MYO1CO00159 1063 aa26.08■■□□□ 1.77
MSX1-201ENST00000382723 FGF4P08620 206 aa26.08■■□□□ 1.77
MSX1-201ENST00000382723 EPHA3P29320 983 aa26.08■■□□□ 1.77
MSX1-201ENST00000382723 BTKQ06187 659 aa26.08■■□□□ 1.77
MSX1-201ENST00000382723 SPATS2Q86XZ4 545 aaKnown RBP26.08■■□□□ 1.77
MSX1-201ENST00000382723 KIRREL3Q8IZU9 778 aa26.08■■□□□ 1.77
MSX1-201ENST00000382723 MAGEC3Q8TD91 643 aa26.08■■□□□ 1.77
MSX1-201ENST00000382723 IMP3Q9NV31 184 aaKnown RBP26.08■■□□□ 1.77
MSX1-201ENST00000382723 SPTY2D1-AS1A0A0U1RR47 76 aa26.08■■□□□ 1.76
MSX1-201ENST00000382723 OTCP00480 354 aa26.08■■□□□ 1.76
MSX1-201ENST00000382723 FNTBP49356 437 aa26.08■■□□□ 1.76
MSX1-201ENST00000382723 PKNOX1P55347 436 aa26.08■■□□□ 1.76
MSX1-201ENST00000382723 CLCA4Q14CN2 919 aa26.08■■□□□ 1.76
MSX1-201ENST00000382723 KANK2Q63ZY3 851 aa26.08■■□□□ 1.76
MSX1-201ENST00000382723 LETMD1Q6P1Q0 360 aa26.08■■□□□ 1.76
MSX1-201ENST00000382723 SLC30A9Q6PML9 568 aa26.08■■□□□ 1.76
MSX1-201ENST00000382723 DCUN1D3Q8IWE4 304 aa26.08■■□□□ 1.76
MSX1-201ENST00000382723 CDYL2Q8N8U2 506 aa26.08■■□□□ 1.76
MSX1-201ENST00000382723 LMNTD1Q8N9Z9 388 aa26.08■■□□□ 1.76
MSX1-201ENST00000382723 OR4F6Q8NGB9 312 aa26.08■■□□□ 1.76
MSX1-201ENST00000382723 OR5K2Q8NHB8 316 aa26.08■■□□□ 1.76
MSX1-201ENST00000382723 ZNF480Q8WV37 535 aa26.08■■□□□ 1.76
MSX1-201ENST00000382723 DNAJC15Q9Y5T4 150 aa26.08■■□□□ 1.76
MSX1-201ENST00000382723 TRPC5OSA6NMA1 111 aa26.07■■□□□ 1.76
MSX1-201ENST00000382723 TNFP01375 233 aa26.07■■□□□ 1.76
MSX1-201ENST00000382723 RPN2P04844 631 aa26.07■■□□□ 1.76
MSX1-201ENST00000382723 PIK3CGP48736 1102 aa26.07■■□□□ 1.76
MSX1-201ENST00000382723 TUBB3Q13509 450 aa26.07■■□□□ 1.76
MSX1-201ENST00000382723 FZD2Q14332 565 aa26.07■■□□□ 1.76
MSX1-201ENST00000382723 UGT3A2Q3SY77 523 aa26.07■■□□□ 1.76
MSX1-201ENST00000382723 TJAP1Q5JTD0 557 aa26.07■■□□□ 1.76
MSX1-201ENST00000382723 ARMCX6Q7L4S7 300 aa26.07■■□□□ 1.76
MSX1-201ENST00000382723 MILR1Q7Z6M3 343 aa26.07■■□□□ 1.76
MSX1-201ENST00000382723 SYTL1Q8IYJ3 562 aa26.07■■□□□ 1.76
MSX1-201ENST00000382723 OR52B2Q96RD2 323 aa26.07■■□□□ 1.76
MSX1-201ENST00000382723 FERD3LQ96RJ6 166 aa26.07■■□□□ 1.76
MSX1-201ENST00000382723 TRIT1Q9H3H1 467 aaKnown RBP26.07■■□□□ 1.76
MSX1-201ENST00000382723 DNAJC11Q9NVH1 559 aa26.07■■□□□ 1.76
MSX1-201ENST00000382723 TBC1D29Q9UFV1 150 aa26.07■■□□□ 1.76
MSX1-201ENST00000382723 TRAF3Q13114 568 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 EIF2B5Q13144 721 aaKnown RBP26.06■■□□□ 1.76
MSX1-201ENST00000382723 TSTA3Q13630 321 aaPredicted RBP26.06■■□□□ 1.76
MSX1-201ENST00000382723 LRP8Q14114 963 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 RAD51AP1Q96B01 352 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 SKA1Q96BD8 255 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 ERP27Q96DN0 273 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 MYLK2Q9H1R3 596 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 TCEAL2Q9H3H9 227 aaPredicted RBP26.06■■□□□ 1.76
MSX1-201ENST00000382723 GPR27Q9NS67 375 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 INTS7Q9NVH2 962 aaKnown RBP26.06■■□□□ 1.76
MSX1-201ENST00000382723 ZFC3H1O60293 1989 aaKnown RBP26.06■■□□□ 1.76
MSX1-201ENST00000382723 OR52A4PA6NMU1 304 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 WNT1P04628 370 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 EPORP19235 508 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 CD38P28907 300 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 ACTR1BP42025 376 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 ACTR1AP61163 376 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 UAP1L1Q3KQV9 507 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 THOC6Q86W42 341 aaKnown RBP26.06■■□□□ 1.76
MSX1-201ENST00000382723 TWIST2Q8WVJ9 160 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 IL17FQ96PD4 163 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 TCF7L2Q9NQB0 619 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 BTRCQ9Y297 605 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 STK38LQ9Y2H1 464 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 PTGDR2Q9Y5Y4 395 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 DGKBQ9Y6T7 804 aa26.06■■□□□ 1.76
MSX1-201ENST00000382723 LAMTOR5O43504 91 aa26.05■■□□□ 1.76
MSX1-201ENST00000382723 UROSP10746 265 aa26.05■■□□□ 1.76
MSX1-201ENST00000382723 GRB7Q14451 532 aa26.05■■□□□ 1.76
MSX1-201ENST00000382723 NXNQ6DKJ4 435 aa26.05■■□□□ 1.76
MSX1-201ENST00000382723 MYLK4Q86YV6 388 aaPredicted RBP26.05■■□□□ 1.76
MSX1-201ENST00000382723 RGL4Q8IZJ4 473 aa26.05■■□□□ 1.76
MSX1-201ENST00000382723 FAM174AQ8TBP5 190 aa26.05■■□□□ 1.76
MSX1-201ENST00000382723 TRNAU1APQ9NX07 287 aaKnown RBP26.05■■□□□ 1.76
MSX1-201ENST00000382723 SCHIP1Q9P0W5 487 aaPredicted RBP26.05■■□□□ 1.76
MSX1-201ENST00000382723 KLF15Q9UIH9 416 aa26.05■■□□□ 1.76
MSX1-201ENST00000382723 ZFP69BQ9UJL9 534 aa26.05■■□□□ 1.76
MSX1-201ENST00000382723 TMEM221A6NGB7 291 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 M0R296 226 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 KRT33BQ14525 404 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms