RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 NMBRP28336 390 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 YAP1P46937 504 aaKnown RBP13.73□□□□□ -0.21
SNPH-201ENST00000381867 DNASE1L1P49184 302 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 WSCD2Q2TBF2 565 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 SLC9B1Q4ZJI4 515 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 PLEKHG4Q58EX7 1191 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 SPAG16Q8N0X2 631 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 SMG8Q8ND04 991 aaKnown RBP13.73□□□□□ -0.21
SNPH-201ENST00000381867 FAM129BQ96TA1 746 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 ARHGAP39Q9C0H5 1083 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 RPL36Q9Y3U8 105 aaKnown RBP13.73□□□□□ -0.21
SNPH-201ENST00000381867 PDCD5O14737 125 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 PAPSS2O95340 614 aaPredicted RBP13.73□□□□□ -0.21
SNPH-201ENST00000381867 CD48P09326 243 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 EEFSECP57772 596 aaKnown RBP13.73□□□□□ -0.21
SNPH-201ENST00000381867 GHRHRQ02643 423 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 GNA12Q03113 381 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 LAPTM5Q13571 262 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 IQCCQ4KMZ1 466 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 ZNF615Q8N8J6 731 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 ZC3H10Q96K80 434 aaKnown RBP13.73□□□□□ -0.21
SNPH-201ENST00000381867 TBATAQ96M53 351 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 LRRC3Q9BY71 257 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 CHIAQ9BZP6 476 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 IKZF4Q9H2S9 585 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 SLC38A8A6NNN8 435 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 POU2F1P14859 743 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 CORO1AP31146 461 aaKnown RBP13.72□□□□□ -0.21
SNPH-201ENST00000381867 ZNF234Q14588 700 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 TSTD2Q5T7W7 516 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 DLK2Q6UY11 383 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 LDB1Q86U70 411 aaPredicted RBP13.72□□□□□ -0.21
SNPH-201ENST00000381867 KCTD13Q8WZ19 329 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 SLC25A51Q9H1U9 297 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 ARHGEF4Q9NR80 690 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 ZDHHC18Q9NUE0 388 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 ATG13O75143 517 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 CYP11A1P05108 521 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 ZNF806P0C7X5 589 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 SPAM1P38567 509 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 CEBPGP53567 150 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 GPR153Q6NV75 609 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 LINGO2Q7L985 606 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 DCBLD1Q8N8Z6 715 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 PCDHAC1Q9H158 963 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 NKX1-2Q9UD57 310 aaPredicted RBP13.72□□□□□ -0.21
SNPH-201ENST00000381867 NUP50Q9UKX7 468 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 MKLN1Q9UL63 735 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 RAI2Q9Y5P3 530 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 OR6C70A6NIJ9 312 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 CDC40O60508 579 aaKnown RBP eCLIP13.72□□□□□ -0.21
SNPH-201ENST00000381867 FECHP22830 423 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 PNLIPRP1P54315 467 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 MTPNP58546 118 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 EIF5AP63241 154 aaKnown RBP13.72□□□□□ -0.21
SNPH-201ENST00000381867 MVKQ03426 396 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 ZNF311Q5JNZ3 666 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 FAAH2Q6GMR7 532 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 ANKRD46Q86W74 232 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 DNASE1L2Q92874 299 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 PIWIL1Q96J94 861 aaKnown RBP13.72□□□□□ -0.21
SNPH-201ENST00000381867 POLR2J2Q9GZM3 115 aaKnown RBP13.72□□□□□ -0.21
SNPH-201ENST00000381867 APOBEC3GQ9HC16 384 aaKnown RBP13.72□□□□□ -0.21
SNPH-201ENST00000381867 NR2E1Q9Y466 385 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 DDX60Q8IY21 1712 aaKnown RBP13.72□□□□□ -0.21
SNPH-201ENST00000381867 CCRL2O00421 344 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 SLC2A2P11168 524 aaPredicted RBP13.72□□□□□ -0.21
SNPH-201ENST00000381867 WASP42768 502 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 RPIAP49247 311 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 NPTX1Q15818 432 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 NIPAL1Q6NVV3 410 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 ESRP1Q6NXG1 681 aaKnown RBP13.72□□□□□ -0.21
SNPH-201ENST00000381867 MED27Q6P2C8 311 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 WFIKKN2Q8TEU8 576 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 NTAN1Q96AB6 310 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 CRELD1Q96HD1 420 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 C1orf109Q9NX04 203 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 CALML5Q9NZT1 146 aa13.72□□□□□ -0.21
SNPH-201ENST00000381867 H3BSA7 217 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 ANXA8P13928 327 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 FOSL2P15408 326 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 ITPKBP27987 946 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 CBLBQ13191 982 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 KLHL35Q6PF15 583 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 QSOX2Q6ZRP7 698 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 NIPA2Q8N8Q9 360 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 KREMEN2Q8NCW0 462 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 OR6K2Q8NGY2 324 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 ZFP3Q96NJ6 502 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 EIF2B4Q9UI10 523 aaKnown RBP13.71□□□□□ -0.21
SNPH-201ENST00000381867 PPM1HQ9ULR3 514 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 ABCG2Q9UNQ0 655 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 NOTOA8MTQ0 251 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 MSI1O43347 362 aaKnown RBP13.71□□□□□ -0.21
SNPH-201ENST00000381867 RBMXL2O75526 392 aaKnown RBP13.71□□□□□ -0.21
SNPH-201ENST00000381867 VNN1O95497 513 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 PEPDP12955 493 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 PDHA2P29803 388 aa13.71□□□□□ -0.21
SNPH-201ENST00000381867 SRSF11Q05519 484 aaKnown RBP13.71□□□□□ -0.21
SNPH-201ENST00000381867 CBFBQ13951 182 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms