RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 SYF2O95926 243 aaKnown RBP18.24■□□□□ 0.51
SMN2-202ENST00000380742 GSTA1P08263 222 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 ALDH4A1P30038 563 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 PLA2G5P39877 138 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 GPR3P46089 330 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 ACADVLP49748 655 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 PLCL1Q15111 1095 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 C16orf46Q6P387 395 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 KLC3Q6P597 504 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 ALYREFQ86V81 257 aaKnown RBP18.24■□□□□ 0.51
SMN2-202ENST00000380742 LCA5Q86VQ0 697 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 Q8N9G6 341 aaPredicted RBP18.24■□□□□ 0.51
SMN2-202ENST00000380742 BANPQ8N9N5 519 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 OR4E2Q8NGC2 313 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 RHEBL1Q8TAI7 183 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 STAG3L4Q8TBR4 150 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 DENND1AQ8TEH3 1009 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 LCN9Q8WX39 176 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 ARL8AQ96BM9 186 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 TSNARE1Q96NA8 513 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 IL17FQ96PD4 163 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 CCDC3Q9BQI4 270 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 DCDC2Q9UHG0 476 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 SPEGQ15772 3267 aa18.24■□□□□ 0.51
SMN2-202ENST00000380742 PTPRZ1P23471 2315 aaPredicted RBP18.24■□□□□ 0.51
SMN2-202ENST00000380742 SNRNP200O75643 2136 aaKnown RBP18.23■□□□□ 0.51
SMN2-202ENST00000380742 GOLGA6L10A6NI86 522 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 KERAO60938 352 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 GLRA3O75311 464 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 HIST1H2AGP0C0S8 130 aaPredicted RBP18.23■□□□□ 0.51
SMN2-202ENST00000380742 HIST1H2ADP20671 130 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 PKLRP30613 574 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 CRHR1P34998 444 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 TGFBIQ15582 683 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 TRIP6Q15654 476 aaKnown RBP18.23■□□□□ 0.51
SMN2-202ENST00000380742 SPRED1Q7Z699 444 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 AMIGO1Q86WK6 493 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 GPSM1Q86YR5 675 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 TMEM151AQ8N4L1 468 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 SCYL1Q96KG9 808 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 HIST1H2AHQ96KK5 128 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 CCDC138Q96M89 665 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 HIST1H2AJQ99878 128 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 SH3GL2Q99962 352 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 H2AFJQ9BTM1 129 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 TRIM54Q9BYV2 358 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 RDH14Q9HBH5 336 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 ARL15Q9NXU5 204 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 KCNK4Q9NYG8 393 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 OGFRQ9NZT2 677 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 SENP1Q9P0U3 644 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 RNF112Q9ULX5 631 aa18.23■□□□□ 0.51
SMN2-202ENST00000380742 IGHV1OR21-1A0A087WYE8 117 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 COPEO14579 308 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 SPAG7O75391 227 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 GUCA1CO95843 209 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 SLC16A8O95907 504 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 SBK3P0C264 359 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 ERGP11308 486 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 TYRP1P17643 537 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 CSRP1P21291 193 aaKnown RBP18.22■□□□□ 0.51
SMN2-202ENST00000380742 SHMT2P34897 504 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 CCT5P48643 541 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 RAB28P51157 221 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 EPHA4P54764 986 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 AP1S2P56377 157 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 ZXDCQ2QGD7 858 aaPredicted RBP18.22■□□□□ 0.51
SMN2-202ENST00000380742 N4BP2L1Q5TBK1 243 aaPredicted RBP18.22■□□□□ 0.51
SMN2-202ENST00000380742 FRA10AC1Q70Z53 315 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 GLRX5Q86SX6 157 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 LINC01555Q8NAE3 123 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 ZNF480Q8WV37 535 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 EXT2Q93063 718 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 TLCD1Q96CP7 247 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 APOPT1Q96IL0 206 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 SMC6Q96SB8 1091 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 C12orf65Q9H3J6 166 aaKnown RBP18.22■□□□□ 0.51
SMN2-202ENST00000380742 SRMSQ9H3Y6 488 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 SLC32A1Q9H598 525 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 MKS1Q9NXB0 559 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 TOR4AQ9NXH8 423 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 SPATA7Q9P0W8 599 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 STOX2Q9P2F5 926 aaPredicted RBP18.22■□□□□ 0.51
SMN2-202ENST00000380742 XPR1Q9UBH6 696 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 CDV3Q9UKY7 258 aaKnown RBP18.22■□□□□ 0.51
SMN2-202ENST00000380742 EMCNQ9ULC0 261 aa18.22■□□□□ 0.51
SMN2-202ENST00000380742 CCDC189A1A4V9 331 aa18.21■□□□□ 0.51
SMN2-202ENST00000380742 NCF1BA6NI72 391 aaPredicted RBP18.21■□□□□ 0.51
SMN2-202ENST00000380742 NCF1CA8MVU1 366 aaPredicted RBP18.21■□□□□ 0.51
SMN2-202ENST00000380742 UBXN8O00124 270 aa18.21■□□□□ 0.51
SMN2-202ENST00000380742 TK2O00142 265 aa18.21■□□□□ 0.51
SMN2-202ENST00000380742 BTN3A3O00478 584 aa18.21■□□□□ 0.51
SMN2-202ENST00000380742 KDM1AO60341 852 aa18.21■□□□□ 0.51
SMN2-202ENST00000380742 UBXN7O94888 489 aa18.21■□□□□ 0.51
SMN2-202ENST00000380742 GP1BAP07359 652 aa18.21■□□□□ 0.51
SMN2-202ENST00000380742 RBP1P09455 135 aa18.21■□□□□ 0.51
SMN2-202ENST00000380742 MTHFD2P13995 350 aa18.21■□□□□ 0.51
SMN2-202ENST00000380742 NCF1P14598 390 aaPredicted RBP18.21■□□□□ 0.51
SMN2-202ENST00000380742 CD1CP29017 333 aa18.21■□□□□ 0.51
SMN2-202ENST00000380742 IMPA1P29218 277 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms