RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 NLRP8Q86W28 1048 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 VRK3Q8IV63 474 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 ANKFN1Q8N957 763 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 EME1Q96AY2 570 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 TMEM159Q96B96 161 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 COQ10AQ96MF6 247 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 ASB16Q96NS5 453 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 DPY30Q9C005 99 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 ZCCHC2Q9C0B9 1178 aaKnown RBP22.54■■□□□ 1.2
VPS16-201ENST00000380443 TRPV4Q9HBA0 871 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 THG1LQ9NWX6 298 aaKnown RBP22.54■■□□□ 1.2
VPS16-201ENST00000380443 ARPC2O15144 300 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 SEC22BO75396 215 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 PCDH1Q08174 1060 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 MAP7Q14244 749 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 PTCHD3Q3KNS1 767 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 SYTL3Q4VX76 610 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 LIPJQ5W064 366 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 SERPINA13PQ6UXR4 307 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 DLEU7Q6UYE1 221 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 ERMP1Q7Z2K6 904 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 KIAA2013Q8IYS2 634 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 RSPRY1Q96DX4 576 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 DTD2Q96FN9 168 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 PPP1R16AQ96I34 528 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 CCDC138Q96M89 665 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 SH3GL1Q99961 368 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 P2RY13Q9BPV8 354 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 ELOVL6Q9H5J4 265 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 GDE1Q9NZC3 331 aa22.54■■□□□ 1.2
VPS16-201ENST00000380443 MBD1Q9UIS9 605 aaPredicted RBP22.54■■□□□ 1.2
VPS16-201ENST00000380443 KCNE1BA0A087WTH5 132 aa22.53■■□□□ 1.2
VPS16-201ENST00000380443 DPPA5A6NC42 116 aa22.53■■□□□ 1.2
VPS16-201ENST00000380443 KPNA3O00505 521 aaPredicted RBP22.53■■□□□ 1.2
VPS16-201ENST00000380443 RNASEH1O60930 286 aaKnown RBP22.53■■□□□ 1.2
VPS16-201ENST00000380443 KCNH1O95259 989 aa22.53■■□□□ 1.2
VPS16-201ENST00000380443 GRM2Q14416 872 aa22.53■■□□□ 1.2
VPS16-201ENST00000380443 PDK3Q15120 406 aa22.53■■□□□ 1.2
VPS16-201ENST00000380443 DUSP6Q16828 381 aa22.53■■□□□ 1.2
VPS16-201ENST00000380443 FAM78AQ5JUQ0 283 aa22.53■■□□□ 1.2
VPS16-201ENST00000380443 RBM23Q86U06 439 aaKnown RBP22.53■■□□□ 1.2
VPS16-201ENST00000380443 C12orf40Q86WS4 652 aa22.53■■□□□ 1.2
VPS16-201ENST00000380443 PACRGLQ8N7B6 248 aa22.53■■□□□ 1.2
VPS16-201ENST00000380443 SELENOMQ8WWX9 145 aa22.53■■□□□ 1.2
VPS16-201ENST00000380443 LRTOMTQ8WZ04 291 aa22.53■■□□□ 1.2
VPS16-201ENST00000380443 CMTM7Q96FZ5 175 aa22.53■■□□□ 1.2
VPS16-201ENST00000380443 CGREF1Q99674 301 aa22.53■■□□□ 1.2
VPS16-201ENST00000380443 LMAN2LQ9H0V9 348 aa22.53■■□□□ 1.2
VPS16-201ENST00000380443 CNOT6Q9ULM6 557 aaKnown RBP22.53■■□□□ 1.2
VPS16-201ENST00000380443 ZNF839A8K0R7 811 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 CATP04040 527 aaKnown RBP22.52■■□□□ 1.2
VPS16-201ENST00000380443 ZNF26P17031 533 aaPredicted RBP22.52■■□□□ 1.2
VPS16-201ENST00000380443 VIPR2P41587 438 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 CREB5Q02930 508 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 TMEM115Q12893 351 aaPredicted RBP22.52■■□□□ 1.2
VPS16-201ENST00000380443 FNDC3BQ53EP0 1204 aaKnown RBP22.52■■□□□ 1.2
VPS16-201ENST00000380443 TCEAL5Q5H9L2 206 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 OR52E8Q6IFG1 317 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 SLC2A7Q6PXP3 512 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 SPRED2Q7Z698 418 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 NPAS3Q8IXF0 933 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 TNIP2Q8NFZ5 429 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 CANT1Q8WVQ1 401 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 SLC13A3Q8WWT9 602 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 FOPNLQ96NB1 174 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 HBEGFQ99075 208 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 DZANK1Q9NVP4 752 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 MAGEL2Q9UJ55 1249 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 PCDHB3Q9Y5E6 796 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 CHD9Q3L8U1 2897 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 SLC5A10A0PJK1 596 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 MTX2O75431 263 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 UBTFL6P0CB48 400 aaPredicted RBP22.52■■□□□ 1.2
VPS16-201ENST00000380443 FSHRP23945 695 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 CASP2P42575 452 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 CHN2P52757 468 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 ELAVL3Q14576 367 aaKnown RBP22.52■■□□□ 1.2
VPS16-201ENST00000380443 MTX3Q5HYI7 312 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 Q7L0L9 218 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 ST13P4Q8IZP2 240 aaPredicted RBP22.52■■□□□ 1.2
VPS16-201ENST00000380443 RASGEF1AQ8N9B8 481 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 PAPD5Q8NDF8 572 aaKnown RBP22.52■■□□□ 1.2
VPS16-201ENST00000380443 METTL2AQ96IZ6 378 aaKnown RBP22.52■■□□□ 1.2
VPS16-201ENST00000380443 MTG2Q9H4K7 406 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 CLMPQ9H6B4 373 aa22.52■■□□□ 1.2
VPS16-201ENST00000380443 FARSBQ9NSD9 589 aaKnown RBP22.52■■□□□ 1.2
VPS16-201ENST00000380443 TXNDC9O14530 226 aa22.51■■□□□ 1.19
VPS16-201ENST00000380443 PDYNP01213 254 aa22.51■■□□□ 1.19
VPS16-201ENST00000380443 JUPP14923 745 aa22.51■■□□□ 1.19
VPS16-201ENST00000380443 HMGCS1Q01581 520 aa22.51■■□□□ 1.19
VPS16-201ENST00000380443 CPSF6Q16630 551 aaKnown RBP eCLIP22.51■■□□□ 1.19
VPS16-201ENST00000380443 BCL7AQ4VC05 210 aa22.51■■□□□ 1.19
VPS16-201ENST00000380443 USP39Q53GS9 565 aaKnown RBP22.51■■□□□ 1.19
VPS16-201ENST00000380443 RABL3Q5HYI8 236 aa22.51■■□□□ 1.19
VPS16-201ENST00000380443 TBCELQ5QJ74 424 aa22.51■■□□□ 1.19
VPS16-201ENST00000380443 C9orf64Q5T6V5 341 aa22.51■■□□□ 1.19
VPS16-201ENST00000380443 SPPL2CQ8IUH8 684 aa22.51■■□□□ 1.19
VPS16-201ENST00000380443 LIX1Q8N485 282 aa22.51■■□□□ 1.19
VPS16-201ENST00000380443 FBXO15Q8NCQ5 510 aaPredicted RBP22.51■■□□□ 1.19
VPS16-201ENST00000380443 TRPV3Q8NET8 790 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms