RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 SOX17Q9H6I2 414 aaPredicted RBP17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 ZNHIT6Q9NWK9 470 aaKnown RBP17.12■□□□□ 0.33
PDLIM4-202ENST00000379018 ANKRD17O75179 2603 aaKnown RBP17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 SYCE3A1L190 88 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 CCDC78A2IDD5 438 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 HACD1B0YJ81 288 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 PSTPIP1O43586 416 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 EDN3P14138 238 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 ACRV1P26436 265 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 ADRA1AP35348 466 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 MARCKSL1P49006 195 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 PRPSAP1Q14558 356 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 TAZQ16635 292 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 LINC00696Q6ZRV3 163 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 TAX1BP1Q86VP1 789 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 FAR1Q8WVX9 515 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 CHP1Q99653 195 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 FAM118BQ9BPY3 351 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 EPS8L2Q9H6S3 715 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 SLC22A11Q9NSA0 550 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 SMARCAL1Q9NZC9 954 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 CIDEBQ9UHD4 219 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 PLCL2Q9UPR0 1127 aa17.11■□□□□ 0.33
PDLIM4-202ENST00000379018 AGAP14A8MT82 685 aa17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 SNRPB2P08579 225 aaKnown RBP17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 MMP11P24347 488 aa17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 TSFMP43897 325 aaKnown RBP17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 CSE1LP55060 971 aaKnown RBP17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 SOX8P57073 446 aa17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 RPA4Q13156 261 aa17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 RBBP7Q16576 425 aa17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 ZNF658BQ4V348 819 aaPredicted RBP17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 SYTL3Q4VX76 610 aa17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 RANBP10Q6VN20 620 aa17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 C2orf73Q8N5S3 287 aaPredicted RBP17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 LMNTD1Q8N9Z9 388 aa17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 OR8K1Q8NGG5 319 aa17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 ELMO1Q92556 727 aa17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 THOC3Q96J01 351 aaKnown RBP17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 CCDC42Q96M95 316 aa17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 TBL1YQ9BQ87 522 aa17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 NHEJ1Q9H9Q4 299 aaPredicted RBP17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 COPG2Q9UBF2 871 aa17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 PRSS21Q9Y6M0 314 aa17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 C2CD3Q4AC94 2353 aa17.1■□□□□ 0.33
PDLIM4-202ENST00000379018 SOCS6O14544 535 aa17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 MAGP20916 626 aa17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 MCM3P25205 808 aa17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 GRNP28799 593 aaKnown RBP17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 PEBP1P30086 187 aaKnown RBP17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 KCNK10P57789 538 aa17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 DBN1Q16643 649 aa17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 TUBB8Q3ZCM7 444 aa17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 DNAJC22Q8N4W6 341 aa17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 CATSPER1Q8NEC5 780 aa17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 FLVCR1-AS1Q8TAF5 88 aa17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 CCDC110Q8TBZ0 833 aa17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 DLG3Q92796 817 aa17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 DNAJC7Q99615 494 aa17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 FERMT1Q9BQL6 677 aa17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 OLAHQ9NV23 265 aa17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 EURLQ9NYK6 297 aa17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 CTSFQ9UBX1 484 aa17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 AAR2Q9Y312 384 aaKnown RBP17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 POLQO75417 2590 aa17.09■□□□□ 0.33
PDLIM4-202ENST00000379018 APCP25054 2843 aa17.08■□□□□ 0.33
PDLIM4-202ENST00000379018 A0A1B0GX78 115 aa17.08■□□□□ 0.32
PDLIM4-202ENST00000379018 ZRANB2O95218 330 aaKnown RBP eCLIP17.08■□□□□ 0.32
PDLIM4-202ENST00000379018 ITGAXP20702 1163 aa17.08■□□□□ 0.32
PDLIM4-202ENST00000379018 TLR1Q15399 786 aa17.08■□□□□ 0.32
PDLIM4-202ENST00000379018 GPR33Q49SQ1 333 aa17.08■□□□□ 0.32
PDLIM4-202ENST00000379018 ANKRD20A2Q5SQ80 823 aa17.08■□□□□ 0.32
PDLIM4-202ENST00000379018 ANKRD20A1Q5TYW2 823 aa17.08■□□□□ 0.32
PDLIM4-202ENST00000379018 ANKRD20A3Q5VUR7 823 aa17.08■□□□□ 0.32
PDLIM4-202ENST00000379018 KIRREL2Q6UWL6 708 aa17.08■□□□□ 0.32
PDLIM4-202ENST00000379018 PRSS58Q8IYP2 241 aa17.08■□□□□ 0.32
PDLIM4-202ENST00000379018 TBC1D21Q8IYX1 336 aa17.08■□□□□ 0.32
PDLIM4-202ENST00000379018 MESP1Q9BRJ9 268 aa17.08■□□□□ 0.32
PDLIM4-202ENST00000379018 LHPPQ9H008 270 aa17.08■□□□□ 0.32
PDLIM4-202ENST00000379018 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.08■□□□□ 0.32
PDLIM4-202ENST00000379018 IMPACTQ9P2X3 320 aa17.08■□□□□ 0.32
PDLIM4-202ENST00000379018 HS3ST3B1Q9Y662 390 aa17.08■□□□□ 0.32
PDLIM4-202ENST00000379018 ALG6Q9Y672 507 aa17.08■□□□□ 0.32
PDLIM4-202ENST00000379018 MAU2Q9Y6X3 613 aa17.08■□□□□ 0.32
PDLIM4-202ENST00000379018 F8P00451 2351 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 IGLV3-16A0A075B6K0 115 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 A0A1B0GUH1 482 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 LIN7AO14910 233 aaPredicted RBP17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 KCNN4O15554 427 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 JRKO75564 520 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 TPBGLP0DKB5 382 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 TPH1P17752 444 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 CTNNA2P26232 953 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 GRIA3P42263 894 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 OR1D4P47884 311 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 NKG7Q16617 165 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 SLC5A12Q1EHB4 618 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 MCATQ8IVS2 390 aaKnown RBP17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 PIANPQ8IYJ0 282 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms