RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 CHUKO15111 745 aa13.4□□□□□ -0.26
PRPF18-202ENST00000378572 STX7O15400 261 aaKnown RBP13.4□□□□□ -0.26
PRPF18-202ENST00000378572 ZNF28P17035 718 aa13.4□□□□□ -0.26
PRPF18-202ENST00000378572 CNTFP26441 200 aa13.4□□□□□ -0.26
PRPF18-202ENST00000378572 ARL4DP49703 201 aa13.4□□□□□ -0.26
PRPF18-202ENST00000378572 PRAMEP78395 509 aa13.4□□□□□ -0.26
PRPF18-202ENST00000378572 ILF2Q12905 390 aaKnown RBP13.4□□□□□ -0.26
PRPF18-202ENST00000378572 ATP13A5Q4VNC0 1218 aa13.4□□□□□ -0.26
PRPF18-202ENST00000378572 KHDC1Q4VXA5 237 aaKnown RBP13.4□□□□□ -0.26
PRPF18-202ENST00000378572 LACTB2Q53H82 288 aaPredicted RBP13.4□□□□□ -0.26
PRPF18-202ENST00000378572 HSP90AA5PQ58FG0 334 aa13.4□□□□□ -0.26
PRPF18-202ENST00000378572 COLEC12Q5KU26 742 aa13.4□□□□□ -0.26
PRPF18-202ENST00000378572 FAM151BQ6UXP7 276 aa13.4□□□□□ -0.26
PRPF18-202ENST00000378572 KIAA0408Q6ZU52 694 aa13.4□□□□□ -0.26
PRPF18-202ENST00000378572 OR4K2Q8NGD2 314 aa13.4□□□□□ -0.26
PRPF18-202ENST00000378572 OR13C4Q8NGS5 318 aa13.4□□□□□ -0.26
PRPF18-202ENST00000378572 ARL8AQ96BM9 186 aa13.4□□□□□ -0.26
PRPF18-202ENST00000378572 TLCD1Q96CP7 247 aa13.4□□□□□ -0.26
PRPF18-202ENST00000378572 CDKN2AIPNLQ96HQ2 116 aa13.4□□□□□ -0.26
PRPF18-202ENST00000378572 ZNF768Q9H5H4 540 aaKnown RBP13.4□□□□□ -0.26
PRPF18-202ENST00000378572 PKP3Q9Y446 797 aa13.4□□□□□ -0.26
PRPF18-202ENST00000378572 KCTD3Q9Y597 815 aa13.4□□□□□ -0.26
PRPF18-202ENST00000378572 IQANK1A0A1B0GTG1 560 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 CCDC78A2IDD5 438 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 SMIM23A6NLE4 172 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 H3BQF6 201 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 KIF1CO43896 1103 aaKnown RBP13.39□□□□□ -0.27
PRPF18-202ENST00000378572 C9P02748 559 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 CCNYL3P0C7X3 344 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 AKT1P31749 480 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 SPAM1P38567 509 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 GP5P40197 560 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 CSE1LP55060 971 aaKnown RBP13.39□□□□□ -0.27
PRPF18-202ENST00000378572 TMEM115Q12893 351 aaPredicted RBP13.39□□□□□ -0.27
PRPF18-202ENST00000378572 THOC5Q13769 683 aaKnown RBP13.39□□□□□ -0.27
PRPF18-202ENST00000378572 MAP7Q14244 749 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 ERV3-1Q14264 604 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 TTMPQ5BVD1 217 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 LGSNQ5TDP6 509 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 NEPROQ6NW34 567 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 CYB5D1Q6P9G0 228 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 AFTPHQ6ULP2 937 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 TAOK1Q7L7X3 1001 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 ZNF547Q8IVP9 402 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 RBM12BQ8IXT5 1001 aaKnown RBP13.39□□□□□ -0.27
PRPF18-202ENST00000378572 GPR150Q8NGU9 434 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 HDAC10Q969S8 669 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 VPS35Q96QK1 796 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 SPRY4Q9C004 299 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 FAM8A1Q9UBU6 413 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 ANAPC2Q9UJX6 822 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 PSMD13Q9UNM6 376 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 CDC14CA4D256 554 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 TOX3O15405 576 aaPredicted RBP13.39□□□□□ -0.27
PRPF18-202ENST00000378572 BUD23O43709 281 aaKnown RBP13.39□□□□□ -0.27
PRPF18-202ENST00000378572 FAM155BO75949 473 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 KRT38O76015 456 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 BRAFP15056 766 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 GRTP1Q5TC63 336 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 ZDHHC20Q5W0Z9 365 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 PACS1Q6VY07 963 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 PRSS42Q7Z5A4 293 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 AMZ2Q86W34 360 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 PPP1R3BQ86XI6 285 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 SIDT2Q8NBJ9 832 aaKnown RBP13.39□□□□□ -0.27
PRPF18-202ENST00000378572 C2CD4AQ8NCU7 369 aaPredicted RBP13.39□□□□□ -0.27
PRPF18-202ENST00000378572 MTBPQ96DY7 904 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 ABHD17AQ96GS6 310 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 CENPHQ9H3R5 247 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 PDE7BQ9NP56 450 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 IARS2Q9NSE4 1012 aaKnown RBP13.39□□□□□ -0.27
PRPF18-202ENST00000378572 IL1RAPL1Q9NZN1 696 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 SENP1Q9P0U3 644 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 TXNDC16Q9P2K2 825 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 CTNNAL1Q9UBT7 734 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 ACTL7BQ9Y614 415 aa13.39□□□□□ -0.27
PRPF18-202ENST00000378572 UBR5O95071 2799 aaPredicted RBP13.38□□□□□ -0.27
PRPF18-202ENST00000378572 GLYATL1P3A0A0U1RQE8 302 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 CCDC162PA2VCL2 907 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 OR2AG2A6NM03 316 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 GPR39O43194 453 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 PIAS1O75925 651 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 OGNP20774 298 aaKnown RBP13.38□□□□□ -0.27
PRPF18-202ENST00000378572 CASRP41180 1078 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 TUBB3Q13509 450 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 IL11RAQ14626 422 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 CHRNA6Q15825 494 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 IGFBP7Q16270 282 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 AGAP9Q5VTM2 703 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 KLHL35Q6PF15 583 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 ABRAXAS1Q6UWZ7 409 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 OR6P1Q8NGX9 317 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 OR4L1Q8NH43 312 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 MZB1Q8WU39 189 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 RBBP8Q99708 897 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 MCMBPQ9BTE3 642 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 TWSG1Q9GZX9 223 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 SLC40A1Q9NP59 571 aa13.38□□□□□ -0.27
PRPF18-202ENST00000378572 IMP3Q9NV31 184 aaKnown RBP13.38□□□□□ -0.27
PRPF18-202ENST00000378572 KCND3Q9UK17 655 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms