RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 B4GALNT1Q00973 533 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 NFATC3Q12968 1075 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 TAF12Q16514 161 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 MEP1AQ16819 746 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 IMPG1Q17R60 797 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 DGKKQ5KSL6 1271 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 BROXQ5VW32 411 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 TXNDC8Q6A555 127 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 KIAA1841Q6NSI8 718 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 SPESP1Q6UW49 350 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 ZC3H7AQ8IWR0 971 aaKnown RBP10.68□□□□□ -0.7
BEST1-201ENST00000378043 SPARTQ8N0X7 666 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 OR10Q1Q8NGQ4 319 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 FAM162AQ96A26 154 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 SCLYQ96I15 445 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 RDH12Q96NR8 316 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 C19orf43Q9BQ61 176 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 CPPED1Q9BRF8 314 aaPredicted RBP10.68□□□□□ -0.7
BEST1-201ENST00000378043 INPP5KQ9BT40 448 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 ABCG8Q9H221 673 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 ADNPQ9H2P0 1102 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 MICAL3Q7RTP6 2002 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 DENND4CQ5VZ89 1909 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 GSNP06396 782 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 RETP07949 1114 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 AGXTP21549 392 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 NEK2P51955 445 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 TMBIM6P55061 237 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 PIGFQ07326 219 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 CD47Q08722 323 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 DPY19L1Q2PZI1 675 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 RBM48Q5RL73 367 aaKnown RBP10.67□□□□□ -0.7
BEST1-201ENST00000378043 C6orf141Q5SZD1 244 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 LRIF1Q5T3J3 769 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 TTC23Q5W5X9 447 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 METTL2BQ6P1Q9 378 aaKnown RBP10.67□□□□□ -0.7
BEST1-201ENST00000378043 Q6ZNX1 250 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 RFLNAQ6ZTI6 216 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 TPGS1Q6ZTW0 290 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 ZBTB46Q86UZ6 589 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 ANKRD46Q86W74 232 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 SLC22A15Q8IZD6 547 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 TERB1Q8NA31 727 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 BPIFB6Q8NFQ5 453 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 FRS2Q8WU20 508 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 HDAC2Q92769 488 aaKnown RBP10.67□□□□□ -0.7
BEST1-201ENST00000378043 ULK4Q96C45 1275 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 TMEFF2Q9UIK5 374 aaPredicted RBP10.67□□□□□ -0.7
BEST1-201ENST00000378043 FBXO10Q9UK96 956 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 PPT2Q9UMR5 302 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 PDE4DIPQ5VU43 2346 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 KIAA1671Q9BY89 1806 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 CLDN9O95484 217 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 LATS1O95835 1130 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 TFPTP0C1Z6 253 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 CCR7P32248 378 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 SPAM1P38567 509 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 CDKN2CP42773 168 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 RPIAP49247 311 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 PLA2G16P53816 162 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 CLDN8P56748 225 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 ISL1P61371 349 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 SLC14A1Q13336 389 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 BFSP2Q13515 415 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 GPR33Q49SQ1 333 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 ATG9BQ674R7 924 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 RETSATQ6NUM9 610 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 CRTC1Q6UUV9 634 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 FAM217AQ8IXS0 508 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 CBARPQ8N350 705 aaPredicted RBP10.67□□□□□ -0.7
BEST1-201ENST00000378043 SVOPLQ8N434 492 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 LZICQ8WZA0 190 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 ABTB1Q969K4 478 aaPredicted RBP10.67□□□□□ -0.7
BEST1-201ENST00000378043 SH3GL1Q99961 368 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 C2orf49Q9BVC5 232 aaPredicted RBP10.67□□□□□ -0.7
BEST1-201ENST00000378043 PAK1IP1Q9NWT1 392 aaPredicted RBP10.67□□□□□ -0.7
BEST1-201ENST00000378043 LMCD1Q9NZU5 365 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 ABT1Q9ULW3 272 aaKnown RBP10.67□□□□□ -0.7
BEST1-201ENST00000378043 PDE10AQ9Y233 779 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 MAN2B2Q9Y2E5 1009 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 CPQQ9Y646 472 aa10.67□□□□□ -0.7
BEST1-201ENST00000378043 DOCK6Q96HP0 2047 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 KCNE1BA0A087WTH5 132 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.66□□□□□ -0.7
BEST1-201ENST00000378043 KRT87PA6NCN2 255 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 PRAMEF4O60810 478 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 SOCS5O75159 536 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 OLFM2O95897 454 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 SERPINA1P01009 418 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 PFKLP17858 780 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 CCNA2P20248 432 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 GSTM2P28161 218 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 MLLT10P55197 1068 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 RPS14P62263 151 aaKnown RBP10.66□□□□□ -0.7
BEST1-201ENST00000378043 SKIV2LQ15477 1246 aaKnown RBP10.66□□□□□ -0.7
BEST1-201ENST00000378043 ZNF829Q3KNS6 432 aaPredicted RBP10.66□□□□□ -0.7
BEST1-201ENST00000378043 PRAMEF9Q5VWM5 478 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 LYPLAL1Q5VWZ2 237 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.66□□□□□ -0.7
BEST1-201ENST00000378043 EGFL6Q8IUX8 553 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms