RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	COLEC10	Q9Y6Z7	277 aa		13.21	□□□□□ -0.3
DDR1-225	ENST00000376568	SDK2	Q58EX2	2172 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	TMEM114	B3SHH9	223 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	KMO	O15229	486 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	HOXC11	O43248	304 aa	Predicted RBP	13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	RGS14	O43566	566 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	SEC24D	O94855	1032 aa	Predicted RBP	13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	CLDN9	O95484	217 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	TSHR	P16473	764 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	GNAZ	P19086	355 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	ADRA1A	P35348	466 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	LEPR	P48357	1165 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	ZNF140	P52738	457 aa	Predicted RBP	13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	OLR1	P78380	273 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	KHDC1	Q4VXA5	237 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	ZNF549	Q6P9A3	640 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	DTD2	Q96FN9	168 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	FGF22	Q9HCT0	170 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	MAP10	Q9P2G4	905 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	DHRS7	Q9Y394	339 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	EVPLL	A8MZ36	301 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	BLK	P51451	505 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	RPS14	P62263	151 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	LSM12	Q3MHD2	195 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	ZDHHC20	Q5W0Z9	365 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	CYP2U1	Q7Z449	544 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	KRT78	Q8N1N4	520 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	PCYOX1L	Q8NBM8	494 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	C19orf60	Q96EN9	201 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	FAM129B	Q96TA1	746 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	SERPINI1	Q99574	410 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	RASSF4	Q9H2L5	321 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	MRPS30	Q9NP92	439 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	C5AR2	Q9P296	337 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	CCDC154	A6NI56	674 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	MYO1C	O00159	1063 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	CD160	O95971	181 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	PEX11B	O96011	259 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	KCNC1	P48547	511 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	MAZ	P56270	477 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	RPL26	P61254	145 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	DLG1	Q12959	904 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	LCP2	Q13094	533 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	PCLAF	Q15004	111 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	PAGE2B	Q5JRK9	111 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	PNCK	Q6P2M8	343 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	TRAM1L1	Q8N609	369 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	KCNJ9	Q92806	393 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	BIRC7	Q96CA5	298 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	PDF	Q9HBH1	243 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	LGALS13	Q9UHV8	139 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	RPL26L1	Q9UNX3	145 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	NDUFAF1	Q9Y375	327 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	FADS3	Q9Y5Q0	445 aa		13.2	□□□□□ -0.3
DDR1-225	ENST00000376568	MLYCD	O95822	493 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	ARNT	P27540	789 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	CCR4	P51679	360 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	FBXW4	P57775	412 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	THOC6	Q86W42	341 aa	Known RBP	13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	OR10Q1	Q8NGQ4	319 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	FAM162A	Q96A26	154 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	FARSB	Q9NSD9	589 aa	Known RBP	13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	GIMAP4	Q9NUV9	329 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	OAS3	Q9Y6K5	1087 aa	Known RBP	13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	PIEZO1	Q92508	2521 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	NDUFS4	O43181	175 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	CD6	P30203	668 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	CRAT	P43155	626 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	NFKB2	Q00653	900 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	CATSPERE	Q5SY80	951 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	CCNYL2	Q5T2Q4	361 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	PRAMEF13	Q5VWM6	474 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	CENPL	Q8N0S6	344 aa	Predicted RBP	13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	TPD52L3	Q96J77	140 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	LRIG1	Q96JA1	1093 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	ARL8B	Q9NVJ2	186 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568		K7EPI3	171 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	ERI3	O43414	337 aa	Known RBP	13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	B4GALT2	O60909	372 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	APBB3	O95704	486 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	ANXA4	P09525	319 aa	Predicted RBP	13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	C2orf80	Q0P641	193 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	HSPB3	Q12988	150 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	MTAP	Q13126	283 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	HKDC1	Q2TB90	917 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	EFL1	Q7Z2Z2	1120 aa	Known RBP	13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	TMEM132C	Q8N3T6	1108 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	TEX26	Q8N6G2	289 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	GBP7	Q8N8V2	638 aa	Predicted RBP	13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	NSMCE3	Q96MG7	304 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	EFCAB1	Q9HAE3	211 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	FAM86C1	Q9NVL1	165 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	POLG2	Q9UHN1	485 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	GPR34	Q9UPC5	381 aa		13.19	□□□□□ -0.3
DDR1-225	ENST00000376568	PIPSL	A2A3N6	862 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	HTR6	P50406	440 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	PGD	P52209	483 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	ISCA2	Q86U28	154 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	CD200R1	Q8TD46	325 aa		13.18	□□□□□ -0.3

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