RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 STC1P52823 247 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 OR4D2P58180 307 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 ZXDBP98169 803 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 ABRAXAS2Q15018 415 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 UPP1Q16831 310 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 GHDCQ8N2G8 530 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 DRAXINQ8NBI3 349 aaPredicted RBP6.41□□□□□ -1.38
SMC1A-202ENST00000375340 PHC3Q8NDX5 983 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 IGSF8Q969P0 613 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 C1GALT1C1Q96EU7 318 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 CDKN2AIPNLQ96HQ2 116 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 GMLQ99445 158 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 DPH2Q9BQC3 489 aaPredicted RBP6.41□□□□□ -1.38
SMC1A-202ENST00000375340 NPLQ9BXD5 320 aaPredicted RBP6.41□□□□□ -1.38
SMC1A-202ENST00000375340 ZCCHC2Q9C0B9 1178 aaKnown RBP6.41□□□□□ -1.38
SMC1A-202ENST00000375340 XPNPEP2O43895 674 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 SCNN1AP37088 669 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 CDKN1CP49918 316 aaPredicted RBP6.41□□□□□ -1.38
SMC1A-202ENST00000375340 SH3BP2P78314 561 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 COL9A2Q14055 689 aaPredicted RBP6.41□□□□□ -1.38
SMC1A-202ENST00000375340 CHRNA6Q15825 494 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 ZNF792Q3KQV3 632 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 TAPT1Q6NXT6 567 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 FUT10Q6P4F1 479 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 KRT74Q7RTS7 529 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 RAD51AP1Q96B01 352 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 SLC35A5Q9BS91 424 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.41□□□□□ -1.38
SMC1A-202ENST00000375340 TMEM39AQ9NV64 488 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 KIAA1522Q9P206 1035 aaPredicted RBP6.41□□□□□ -1.38
SMC1A-202ENST00000375340 SMCHD1A6NHR9 2005 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 ZCWPW2A0A1B0GU75 182 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 A0A1W2PP18 115 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 PRORSD1PA6NEY8 169 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 ARVCFO00192 962 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 ATG13O75143 517 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 JUNP05412 331 aaKnown RBP6.41□□□□□ -1.38
SMC1A-202ENST00000375340 IFNGR2P38484 337 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 RNF144AP50876 292 aaPredicted RBP6.41□□□□□ -1.38
SMC1A-202ENST00000375340 MLLT10P55197 1068 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 ELP6Q0PNE2 266 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 FOXB2Q5VYV0 432 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 KRT78Q8N1N4 520 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 AUTS2Q8WXX7 1259 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 C16orf70Q9BSU1 422 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 KAT8Q9H7Z6 458 aaKnown RBP6.41□□□□□ -1.38
SMC1A-202ENST00000375340 ASAH2Q9NR71 780 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 CTPS2Q9NRF8 586 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 TMEM248Q9NWD8 314 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 MIOSQ9NXC5 875 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 LOC730098B7Z3J9 87 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 ABCB7O75027 752 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 CCR4P51679 360 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 ARSDP51689 593 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 FOXM1Q08050 763 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 SNAPC1Q16533 368 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 TNFAIP8L2Q6P589 184 aaPredicted RBP6.41□□□□□ -1.38
SMC1A-202ENST00000375340 GALNT10Q86SR1 603 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 TMEM199Q8N511 208 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 FIBCD1Q8N539 461 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 TRIM63Q969Q1 353 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 PYURFQ96I23 114 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 LHPPQ9H008 270 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 SMG9Q9H0W8 520 aaKnown RBP6.41□□□□□ -1.38
SMC1A-202ENST00000375340 MAGEH1Q9H213 219 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 KLHL28Q9NXS3 571 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 GSTK1Q9Y2Q3 226 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 CEPT1Q9Y6K0 416 aa6.41□□□□□ -1.38
SMC1A-202ENST00000375340 STK25O00506 426 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 DFNA5O60443 496 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 PDYNP01213 254 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 IL1BP01584 269 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 PABPC4LP0CB38 370 aaKnown RBP6.4□□□□□ -1.38
SMC1A-202ENST00000375340 ATP4BP51164 291 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 PHC1P78364 1004 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 SKIV2LQ15477 1246 aaKnown RBP6.4□□□□□ -1.38
SMC1A-202ENST00000375340 SPANXN4Q5MJ08 99 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 CHST9Q7L1S5 443 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 TCAIMQ8N3R3 496 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 TMEM203Q969S6 136 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 PTERQ96BW5 349 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 RANBP9Q96S59 729 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 YIPF4Q9BSR8 244 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 SEZ6LQ9BYH1 1024 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 IGFLR1Q9H665 355 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 TBC1D17Q9HA65 648 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 H0YC42 278 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 B4GAT1O43505 415 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 CREG1O75629 220 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 VIPP01282 170 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 PSMD8P48556 350 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 CBX2Q14781 532 aaPredicted RBP6.4□□□□□ -1.38
SMC1A-202ENST00000375340 PTGR1Q14914 329 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 ERICH5Q6P6B1 374 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 ZNF730Q6ZMV8 503 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 CFAP206Q8IYR0 622 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 ANKFN1Q8N957 763 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 CSGALNACT1Q8TDX6 532 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 MZB1Q8WU39 189 aa6.4□□□□□ -1.38
SMC1A-202ENST00000375340 ING5Q8WYH8 240 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms