RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 VEPH1Q14D04 833 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 MAPRE1Q15691 268 aaKnown RBP4.5□□□□□ -1.69
PMS1-202ENST00000374826 TAF12Q16514 161 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 EXOC3L4Q17RC7 722 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 GOLGA7BQ2TAP0 167 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 PLK5Q496M5 336 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 C5orf22Q49AR2 442 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 GXYLT1Q4G148 440 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 STXBP5Q5T5C0 1151 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 OTUD1Q5VV17 481 aaPredicted RBP4.5□□□□□ -1.69
PMS1-202ENST00000374826 DCAF12L2Q5VW00 463 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 MTFR2Q6P444 385 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 FAM171BQ6P995 826 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 TMEM270Q6UE05 265 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 GBP6Q6ZN66 633 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 C4orf50Q6ZRC1 276 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 LUZP1Q86V48 1076 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 UNC93AQ86WB7 457 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 TMC8Q8IU68 726 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 CADM3Q8N126 398 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 ELMOD1Q8N336 334 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 C12orf29Q8N999 325 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 LRRC57Q8N9N7 239 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 TDRD5Q8NAT2 981 aaKnown RBP4.5□□□□□ -1.69
PMS1-202ENST00000374826 SLC4A11Q8NBS3 891 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 ITFG1Q8TB96 612 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 SLC2A14Q8TDB8 520 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 C2orf15Q8WU43 125 aaKnown RBP4.5□□□□□ -1.69
PMS1-202ENST00000374826 NR4A3Q92570 626 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 KCNJ9Q92806 393 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 NECTIN4Q96NY8 510 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 MYADMQ96S97 322 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 BPIFA3Q9BQP9 254 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 PHF7Q9BWX1 381 aaPredicted RBP4.5□□□□□ -1.69
PMS1-202ENST00000374826 TRIM31Q9BZY9 425 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 NDST4Q9H3R1 872 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 CYP3A43Q9HB55 503 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 WDR6Q9NNW5 1121 aaKnown RBP4.5□□□□□ -1.69
PMS1-202ENST00000374826 SIX2Q9NPC8 291 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 ASAH2Q9NR71 780 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 SLC22A11Q9NSA0 550 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 NDUFAF4Q9P032 175 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 WNT16Q9UBV4 365 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 BAG5Q9UL15 447 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 FZD10Q9ULW2 581 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 RCE1Q9Y256 329 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 PTGDR2Q9Y5Y4 395 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 CACNA1HO95180 2353 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 MUC6Q6W4X9 2439 aa4.5□□□□□ -1.69
PMS1-202ENST00000374826 ABCA7Q8IZY2 2146 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 TDRD6O60522 2096 aaKnown RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 ADAMTS9Q9P2N4 1935 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 FAM170AA1A519 330 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 GTPBP10A4D1E9 387 aaKnown RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 LOC730098B7Z3J9 87 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 EPHB6O15197 1021 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 HNRNPRO43390 633 aaKnown RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 BEST1O76090 585 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 GAS8-AS1O95177 125 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 LCATP04180 440 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 TPM2P07951 284 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 FGF3P11487 239 aaPredicted RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 KRT5P13647 590 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 ZNF18P17022 549 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 HMGA1P17096 107 aaKnown RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 TRIM21P19474 475 aaKnown RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 PON1P27169 355 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 GABRR2P28476 465 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 TYK2P29597 1187 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 USP8P40818 1118 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 MAGEA11P43364 429 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 TUFMP49411 452 aaKnown RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 MAP3K7CLP57077 242 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 YWHAEP62258 255 aaKnown RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 RPL10AP62906 217 aaKnown RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 LTBQ06643 244 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 SMARCB1Q12824 385 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 ALKBH1Q13686 389 aaKnown RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 NFATC4Q14934 902 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 SYCP1Q15431 976 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 TEAD2Q15562 447 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 CFAP221Q4G0U5 840 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 CYP4A22Q5TCH4 519 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 GSG1LQ6UXU4 331 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 CLEC20AQ6ZU45 233 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 PAQR9Q6ZVX9 377 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 APTXQ7Z2E3 356 aaKnown RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 RNF144BQ7Z419 303 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 DNAJB7Q7Z6W7 309 aaPredicted RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 ITIH5Q86UX2 942 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 MYLK4Q86YV6 388 aaPredicted RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 PRR26Q8N8Z3 221 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 ZMIZ2Q8NF64 920 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 ANKRD20A12PQ8NF67 263 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 ELP5Q8TE02 316 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 FGF13Q92913 245 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 PSMG2Q969U7 264 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 SMARCD1Q96GM5 515 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 MED30Q96HR3 178 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 GCNAQ96QF7 691 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms