RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 ARMC3Q5W041 872 aa20.95■□□□□ 0.94
CCDC28B-201ENST00000373602 TTC27Q6P3X3 843 aa20.95■□□□□ 0.94
CCDC28B-201ENST00000373602 CES3Q6UWW8 571 aa20.95■□□□□ 0.94
CCDC28B-201ENST00000373602 APLFQ8IW19 511 aaPredicted RBP20.95■□□□□ 0.94
CCDC28B-201ENST00000373602 DCUN1D3Q8IWE4 304 aa20.95■□□□□ 0.94
CCDC28B-201ENST00000373602 SYTL1Q8IYJ3 562 aa20.95■□□□□ 0.94
CCDC28B-201ENST00000373602 THAP4Q8WY91 577 aa20.95■□□□□ 0.94
CCDC28B-201ENST00000373602 NLNQ9BYT8 704 aa20.95■□□□□ 0.94
CCDC28B-201ENST00000373602 TRIM4Q9C037 500 aa20.95■□□□□ 0.94
CCDC28B-201ENST00000373602 MKRN2OSH3BPM6 223 aa20.94■□□□□ 0.94
CCDC28B-201ENST00000373602 ZNF749O43361 778 aa20.94■□□□□ 0.94
CCDC28B-201ENST00000373602 HCRTR1O43613 425 aa20.94■□□□□ 0.94
CCDC28B-201ENST00000373602 RFPL1O75677 317 aa20.94■□□□□ 0.94
CCDC28B-201ENST00000373602 KRT14P02533 472 aa20.94■□□□□ 0.94
CCDC28B-201ENST00000373602 CAPN1P07384 714 aa20.94■□□□□ 0.94
CCDC28B-201ENST00000373602 HBQ1P09105 142 aa20.94■□□□□ 0.94
CCDC28B-201ENST00000373602 SARNPP82979 210 aaKnown RBP20.94■□□□□ 0.94
CCDC28B-201ENST00000373602 IL10RAQ13651 578 aa20.94■□□□□ 0.94
CCDC28B-201ENST00000373602 MRNIPQ6NTE8 343 aa20.94■□□□□ 0.94
CCDC28B-201ENST00000373602 FAM198BQ6UWH4 519 aa20.94■□□□□ 0.94
CCDC28B-201ENST00000373602 GPR135Q8IZ08 494 aa20.94■□□□□ 0.94
CCDC28B-201ENST00000373602 ENDOVQ8N8Q3 282 aaKnown RBP20.94■□□□□ 0.94
CCDC28B-201ENST00000373602 LINC01555Q8NAE3 123 aa20.94■□□□□ 0.94
CCDC28B-201ENST00000373602 CFAP61Q8NHU2 1237 aa20.94■□□□□ 0.94
CCDC28B-201ENST00000373602 MAGOHBQ96A72 148 aaKnown RBP20.94■□□□□ 0.94
CCDC28B-201ENST00000373602 MS4A14Q96JA4 679 aa20.94■□□□□ 0.94
CCDC28B-201ENST00000373602 ANAPC2Q9UJX6 822 aa20.94■□□□□ 0.94
CCDC28B-201ENST00000373602 BOD1L1Q8NFC6 3051 aa20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 H3BMH7 237 aa20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 KPNA5O15131 536 aa20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 AVILO75366 819 aa20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 CSRP3P50461 194 aa20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 TERF1P54274 439 aa20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 KCNC4Q03721 635 aa20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 CYP1B1Q16678 543 aa20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 TYSND1Q2T9J0 566 aa20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 DEFB110Q30KQ9 67 aa20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 CTSL3PQ5NE16 218 aa20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 ANKRD22Q5VYY1 191 aa20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 ZNF385CQ66K41 422 aaPredicted RBP20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 KIAA0930Q6ICG6 404 aaPredicted RBP20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 TCTN3Q6NUS6 607 aa20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 SDCCAG8Q86SQ7 713 aaPredicted RBP20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 OTUD6BQ8N6M0 293 aa20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 N4BP2L2Q92802 583 aaPredicted RBP20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 BIRC8Q96P09 236 aa20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 DPH2Q9BQC3 489 aaPredicted RBP20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 SLC7A5P2Q9GIP4 190 aa20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 TLK1Q9UKI8 766 aa20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 AP1M2Q9Y6Q5 423 aa20.93■□□□□ 0.94
CCDC28B-201ENST00000373602 SEC16AO15027 2179 aa20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 GOLGA8KD6RF30 607 aa20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 GOLGA8TH3BQL2 631 aa20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 OR2B3O76000 313 aa20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 CD9P21926 228 aa20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 EIF3BP55884 814 aaKnown RBP20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 PTCHD3Q3KNS1 767 aa20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 RNF187Q5TA31 235 aaPredicted RBP20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 OTOAQ7RTW8 1153 aa20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 CAND1Q86VP6 1230 aaKnown RBP20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 DNAJC22Q8N4W6 341 aa20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 ADAMTS17Q8TE56 1095 aa20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 LPGAT1Q92604 370 aa20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 TCF12Q99081 682 aa20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 TRIM55Q9BYV6 548 aa20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 SPRTNQ9H040 489 aaPredicted RBP20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 CLMPQ9H6B4 373 aa20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 CIDEBQ9UHD4 219 aa20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 TCFL5Q9UL49 500 aa20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 SNX7Q9UNH6 387 aa20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 TP53TG5Q9Y2B4 290 aa20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 NEU2Q9Y3R4 380 aa20.92■□□□□ 0.94
CCDC28B-201ENST00000373602 K7EM74 188 aa20.91■□□□□ 0.94
CCDC28B-201ENST00000373602 TMEM63AO94886 807 aa20.91■□□□□ 0.94
CCDC28B-201ENST00000373602 MLNP12872 115 aa20.91■□□□□ 0.94
CCDC28B-201ENST00000373602 OGNP20774 298 aaKnown RBP20.91■□□□□ 0.94
CCDC28B-201ENST00000373602 AGXTP21549 392 aa20.91■□□□□ 0.94
CCDC28B-201ENST00000373602 COILP38432 576 aaPredicted RBP20.91■□□□□ 0.94
CCDC28B-201ENST00000373602 CASRP41180 1078 aa20.91■□□□□ 0.94
CCDC28B-201ENST00000373602 TLE1Q04724 770 aa20.91■□□□□ 0.94
CCDC28B-201ENST00000373602 REXO1L1PQ8IX06 675 aa20.91■□□□□ 0.94
CCDC28B-201ENST00000373602 FAM20CQ8IXL6 584 aa20.91■□□□□ 0.94
CCDC28B-201ENST00000373602 MCUQ8NE86 351 aa20.91■□□□□ 0.94
CCDC28B-201ENST00000373602 OR2L8Q8NGY9 312 aa20.91■□□□□ 0.94
CCDC28B-201ENST00000373602 GSDMBQ8TAX9 411 aa20.91■□□□□ 0.94
CCDC28B-201ENST00000373602 SLC22A18Q96BI1 424 aa20.91■□□□□ 0.94
CCDC28B-201ENST00000373602 IL17FQ96PD4 163 aa20.91■□□□□ 0.94
CCDC28B-201ENST00000373602 NAP1L3Q99457 506 aaPredicted RBP20.91■□□□□ 0.94
CCDC28B-201ENST00000373602 EPN3Q9H201 632 aa20.91■□□□□ 0.94
CCDC28B-201ENST00000373602 RASGRF2O14827 1237 aa20.9■□□□□ 0.94
CCDC28B-201ENST00000373602 PFDN6O15212 129 aa20.9■□□□□ 0.94
CCDC28B-201ENST00000373602 DNAJB5O75953 348 aa20.9■□□□□ 0.94
CCDC28B-201ENST00000373602 S1PR4O95977 384 aa20.9■□□□□ 0.94
CCDC28B-201ENST00000373602 PAMP19021 973 aa20.9■□□□□ 0.94
CCDC28B-201ENST00000373602 NR1D1P20393 614 aa20.9■□□□□ 0.94
CCDC28B-201ENST00000373602 MAGP20916 626 aa20.9■□□□□ 0.94
CCDC28B-201ENST00000373602 FMO4P31512 558 aa20.9■□□□□ 0.94
CCDC28B-201ENST00000373602 ADARP55265 1226 aaKnown RBP20.9■□□□□ 0.94
CCDC28B-201ENST00000373602 NCF4Q15080 339 aa20.9■□□□□ 0.94
CCDC28B-201ENST00000373602 RHBDD2Q6NTF9 364 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms