RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 MT-ND1P03886 318 aa20.09■□□□□ 0.81
VEGFA-204ENST00000372064 RAP2AP10114 183 aa20.09■□□□□ 0.81
VEGFA-204ENST00000372064 BCKDHAP12694 445 aa20.09■□□□□ 0.81
VEGFA-204ENST00000372064 PRPH2P23942 346 aa20.09■□□□□ 0.81
VEGFA-204ENST00000372064 HNMTP50135 292 aa20.09■□□□□ 0.81
VEGFA-204ENST00000372064 CYP4F3Q08477 520 aa20.09■□□□□ 0.81
VEGFA-204ENST00000372064 SLC44A4Q53GD3 710 aa20.09■□□□□ 0.81
VEGFA-204ENST00000372064 CYBRD1Q53TN4 286 aa20.09■□□□□ 0.81
VEGFA-204ENST00000372064 TMEM215Q68D42 235 aa20.09■□□□□ 0.81
VEGFA-204ENST00000372064 ZNF548Q8NEK5 533 aaPredicted RBP20.09■□□□□ 0.81
VEGFA-204ENST00000372064 ITFG1Q8TB96 612 aa20.09■□□□□ 0.81
VEGFA-204ENST00000372064 SCAMP4Q969E2 229 aa20.09■□□□□ 0.81
VEGFA-204ENST00000372064 TDP1Q9NUW8 608 aa20.09■□□□□ 0.81
VEGFA-204ENST00000372064 TRBV5-3A0A0A0MS03 114 aa20.08■□□□□ 0.81
VEGFA-204ENST00000372064 ATP1B2P14415 290 aaPredicted RBP20.08■□□□□ 0.81
VEGFA-204ENST00000372064 CDH2P19022 906 aaPredicted RBP20.08■□□□□ 0.81
VEGFA-204ENST00000372064 SP140Q13342 867 aa20.08■□□□□ 0.81
VEGFA-204ENST00000372064 BOP1Q14137 746 aaKnown RBP20.08■□□□□ 0.81
VEGFA-204ENST00000372064 LY6G5CQ5SRR4 150 aa20.08■□□□□ 0.81
VEGFA-204ENST00000372064 PLEKHS1Q5SXH7 462 aa20.08■□□□□ 0.81
VEGFA-204ENST00000372064 PLPP6Q8IY26 295 aa20.08■□□□□ 0.81
VEGFA-204ENST00000372064 OR2T12Q8NG77 320 aa20.08■□□□□ 0.81
VEGFA-204ENST00000372064 SORCS1Q8WY21 1168 aa20.08■□□□□ 0.81
VEGFA-204ENST00000372064 BEGAINQ9BUH8 593 aa20.08■□□□□ 0.81
VEGFA-204ENST00000372064 THEGQ9P2T0 379 aa20.08■□□□□ 0.81
VEGFA-204ENST00000372064 KRT87PA6NCN2 255 aa20.08■□□□□ 0.8
VEGFA-204ENST00000372064 UPK1AO00322 258 aa20.08■□□□□ 0.8
VEGFA-204ENST00000372064 SLC16A5O15375 505 aa20.08■□□□□ 0.8
VEGFA-204ENST00000372064 CAPGP40121 348 aa20.08■□□□□ 0.8
VEGFA-204ENST00000372064 POLR2LP62875 67 aaKnown RBP20.08■□□□□ 0.8
VEGFA-204ENST00000372064 RUNDC3AQ59EK9 446 aa20.08■□□□□ 0.8
VEGFA-204ENST00000372064 NAT16Q8N8M0 369 aa20.08■□□□□ 0.8
VEGFA-204ENST00000372064 OR52E4Q8NGH9 312 aa20.08■□□□□ 0.8
VEGFA-204ENST00000372064 VPS50Q96JG6 964 aa20.08■□□□□ 0.8
VEGFA-204ENST00000372064 IKZF5Q9H5V7 419 aa20.08■□□□□ 0.8
VEGFA-204ENST00000372064 C11orf49Q9H6J7 331 aa20.08■□□□□ 0.8
VEGFA-204ENST00000372064 SPHK2Q9NRA0 654 aa20.08■□□□□ 0.8
VEGFA-204ENST00000372064 KIAA0100Q14667 2235 aaKnown RBP20.08■□□□□ 0.8
VEGFA-204ENST00000372064 GFYI3L273 518 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 AREL1O15033 823 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 MAP7Q14244 749 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 FAM98BQ52LJ0 330 aaKnown RBP20.07■□□□□ 0.8
VEGFA-204ENST00000372064 USP51Q70EK9 711 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 L3MBTL4Q8NA19 623 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 DNAJB8Q8NHS0 232 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 MPP4Q96JB8 637 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 SH3GL1Q99961 368 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 PKD2L2Q9NZM6 624 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 AP3M1Q9Y2T2 418 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 FADS3Q9Y5Q0 445 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 HCFC2Q9Y5Z7 792 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 CCDC160A6NGH7 325 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 NPIPB8E9PQR5 432 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 H3BSA7 217 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 KIAA0355O15063 1070 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 HTRA4P83105 476 aaPredicted RBP20.07■□□□□ 0.8
VEGFA-204ENST00000372064 TTC33Q6PID6 262 aaPredicted RBP20.07■□□□□ 0.8
VEGFA-204ENST00000372064 TBPL2Q6SJ96 375 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 CLHC1Q8NHS4 586 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 ADAMTS16Q8TE57 1224 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 CYB5D2Q8WUJ1 264 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 CLP1Q92989 425 aaKnown RBP20.07■□□□□ 0.8
VEGFA-204ENST00000372064 PYCR2Q96C36 320 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 FBXL20Q96IG2 436 aa20.07■□□□□ 0.8
VEGFA-204ENST00000372064 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.07■□□□□ 0.8
VEGFA-204ENST00000372064 RHOP08100 348 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 ZNF30P17039 623 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 EPHA5P54756 1037 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 CLDN8P56748 225 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 BRAT1Q6PJG6 821 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 HSD11B1LQ7Z5J1 315 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 DHRSXQ8N5I4 330 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 LEMD2Q8NC56 503 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 OR10A6Q8NH74 314 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 MAGEE2Q8TD90 523 aaPredicted RBP20.06■□□□□ 0.8
VEGFA-204ENST00000372064 CYGBQ8WWM9 190 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 OR52E6Q96RD3 313 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 SNX6Q9UNH7 406 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 HIST1H2AGP0C0S8 130 aaPredicted RBP20.06■□□□□ 0.8
VEGFA-204ENST00000372064 HIST1H2ADP20671 130 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 RECQLP46063 649 aaPredicted RBP20.06■□□□□ 0.8
VEGFA-204ENST00000372064 RPS14P62263 151 aaKnown RBP20.06■□□□□ 0.8
VEGFA-204ENST00000372064 NTHL1P78549 312 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 ADARB1P78563 741 aaKnown RBP20.06■□□□□ 0.8
VEGFA-204ENST00000372064 DMC1Q14565 340 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 PATL1Q86TB9 770 aaKnown RBP20.06■□□□□ 0.8
VEGFA-204ENST00000372064 RASGRP3Q8IV61 690 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 ZNF786Q8N393 782 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 HIST1H2AHQ96KK5 128 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 HIST1H2AJQ99878 128 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 H2AFJQ9BTM1 129 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 THUMPD3Q9BV44 507 aaKnown RBP20.06■□□□□ 0.8
VEGFA-204ENST00000372064 MTG2Q9H4K7 406 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 MAN2B2Q9Y2E5 1009 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 DLGAP4Q9Y2H0 992 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 WNT6Q9Y6F9 365 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 SERTM1A2A2V5 107 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 DEAF1O75398 565 aaPredicted RBP20.06■□□□□ 0.8
VEGFA-204ENST00000372064 GMNNO75496 209 aa20.06■□□□□ 0.8
VEGFA-204ENST00000372064 NFKBIAP25963 317 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms