RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 AKAP13Q12802 2813 aa14.38□□□□□ -0.11
COL9A1-204ENST00000370496 PIPSLA2A3N6 862 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 KRT87PA6NCN2 255 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 EFCAB7A8K855 629 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 C1QTNF9BB2RNN3 333 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 KIF1CO43896 1103 aaKnown RBP14.37□□□□□ -0.11
COL9A1-204ENST00000370496 FAM155BO75949 473 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 C8GP07360 202 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 CHRM5P08912 532 aaPredicted RBP14.37□□□□□ -0.11
COL9A1-204ENST00000370496 FAM153BP0C7A2 387 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 C1QTNF9P0C862 333 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 MYBL2P10244 700 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 ITIH1P19827 911 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 CYP2A7P20853 494 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 CDH3P22223 829 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 RBMS1P29558 406 aaKnown RBP14.37□□□□□ -0.11
COL9A1-204ENST00000370496 LSSP48449 732 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 ARL4DP49703 201 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 KPNA2P52292 529 aaKnown RBP14.37□□□□□ -0.11
COL9A1-204ENST00000370496 MAPK10P53779 464 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 TAS2R39P59534 338 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 SP140Q13342 867 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 RTP5Q14D33 572 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 FAM153CQ494X1 144 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 CCSMST1Q4G0I0 132 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 UBE2R2Q712K3 238 aaPredicted RBP14.37□□□□□ -0.11
COL9A1-204ENST00000370496 ARHGAP22Q7Z5H3 698 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 ADGRF3Q8IZF5 1079 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 LSMEM2Q8N112 164 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 UHMK1Q8TAS1 419 aaKnown RBP14.37□□□□□ -0.11
COL9A1-204ENST00000370496 MDM1Q8TC05 714 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 UBXN4Q92575 508 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 ZNF768Q9H5H4 540 aaKnown RBP14.37□□□□□ -0.11
COL9A1-204ENST00000370496 CCDC86Q9H6F5 360 aaKnown RBP14.37□□□□□ -0.11
COL9A1-204ENST00000370496 ANKZF1Q9H8Y5 726 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 CAB39LQ9H9S4 337 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 POPDC3Q9HBV1 291 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 GPAMQ9HCL2 828 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 SOHLH2Q9NX45 425 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 MTO1Q9Y2Z2 717 aaKnown RBP14.37□□□□□ -0.11
COL9A1-204ENST00000370496 PCDHGA8Q9Y5G5 932 aa14.37□□□□□ -0.11
COL9A1-204ENST00000370496 EXOC1LA0A1B0GW35 172 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 A0A1W2PNU3 283 aaPredicted RBP14.36□□□□□ -0.11
COL9A1-204ENST00000370496 ISM1B1AKI9 464 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 ZBTB14O43829 449 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 TNFSF15O95150 251 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 INHBAP08476 426 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 ITGA2BP08514 1039 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 ABHD2P08910 425 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 TPBGLP0DKB5 382 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 STMN1P16949 149 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 GRB7Q14451 532 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 ANKS6Q68DC2 871 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 SPESP1Q6UW49 350 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 TAOK1Q7L7X3 1001 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 CEP97Q8IW35 865 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 PIP4P2Q8N4L2 257 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 NKAPQ8N5F7 415 aaKnown RBP14.36□□□□□ -0.11
COL9A1-204ENST00000370496 C2orf73Q8N5S3 287 aaPredicted RBP14.36□□□□□ -0.11
COL9A1-204ENST00000370496 OR9A1PQ8NGU1 263 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 OR2L8Q8NGY9 312 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 ASB11Q8WXH4 323 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 ZCCHC14Q8WYQ9 949 aaKnown RBP14.36□□□□□ -0.11
COL9A1-204ENST00000370496 MAP3K3Q99759 626 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 TMEM121BQ9BXQ6 578 aaPredicted RBP14.36□□□□□ -0.11
COL9A1-204ENST00000370496 FUT8Q9BYC5 575 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 SYTL2Q9HCH5 934 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 LNPEPQ9UIQ6 1025 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 ASPMQ8IZT6 3477 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 KNTC1P50748 2209 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 WDFY3Q8IZQ1 3526 aa14.36□□□□□ -0.11
COL9A1-204ENST00000370496 IGHV5-51A0A0C4DH38 117 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 ZNF839A8K0R7 811 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 MYO1CO00159 1063 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 PHGDHO43175 533 aaKnown RBP14.35□□□□□ -0.11
COL9A1-204ENST00000370496 RIPK2O43353 540 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 TSPAN12O95859 305 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 CCL4P13236 92 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 UGT2B7P16662 529 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 PRDX3P30048 256 aaKnown RBP14.35□□□□□ -0.11
COL9A1-204ENST00000370496 RAB10P61026 200 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 CYP4F3Q08477 520 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 TSTA3Q13630 321 aaPredicted RBP14.35□□□□□ -0.11
COL9A1-204ENST00000370496 BMPR2Q13873 1038 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 KIR2DS3Q14952 304 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 RAPH1Q70E73 1250 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 CARFQ8N187 725 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 LINC01555Q8NAE3 123 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 FBXO15Q8NCQ5 510 aaPredicted RBP14.35□□□□□ -0.11
COL9A1-204ENST00000370496 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.35□□□□□ -0.11
COL9A1-204ENST00000370496 PAFAH2Q99487 392 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 MENTQ9BUN1 341 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 THSD1Q9NS62 852 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 SPHK1Q9NYA1 384 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 ADAMTS6Q9UKP5 1117 aa14.35□□□□□ -0.11
COL9A1-204ENST00000370496 TMEM8BA6NDV4 472 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 NPEPPSL1A6NEC2 478 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 POC1B-GALNT4F8VUJ3 575 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 GFYI3L273 518 aa14.34□□□□□ -0.11
COL9A1-204ENST00000370496 MAP3K7O43318 606 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms